| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294493
Identifier: 197294493
GI number: 197294493
Start: 428211
End: 428843
Strand: Direct
Name: 197294493
Synonym: PAa_0430
Alternate gene names: NA
Gene position: 428211-428843 (Clockwise)
Preceding gene: 197294481
Following gene: 197294494
Centisome position: 48.66
GC content: 24.8
Gene sequence:
>633_bases ATGAAACAAATATCTAATTTAGATTTTAATAATATTAACGTTTTTAATCATAAATCTTTGTGCGTTAACATAACCAAACA AATAGTTCAACCAATTTTTTTCAATAAAGCTTTTAATCAGTATATGTTTGATTGTCATAATATACTCAATGAATATTTAA CCAACAACCAATACAACTCTCAAAGTCAAAAATCAATTCGAGGAAAAATTAACGAATACTTAATTTTGCTTTATCTAAAT CACAAAGGAATTAAATATTTATATCCTCAATCATATTTATTTTTCATCCCTGATATTAAATTTGATTTAGTGTTGTTTAC CAAAACTAAACGCATCATTGCTTTCAATTTCAAAACTTGCCTTAGAGAAAGATACAAACAATCAATAGTAGAAGGACAAC AACTAAAAAAACTAGACACTCGTTTTGGGTTTTATTTGTTAACAAATGATGAATCCGAAACTCAAAGATTAAATAATAAA ATTAAAAATGGTAAAGTACAATCAATTAACAAAGTAATCAATTTATTTTCCAATTCAGCTAATCTCTTCTTACAAAACTT ACTAACCAACCAATTCATTCCCTTTTCACCTATTAATTTAATTAAAAAGATGGTTCACCCTAATGACAAATAA
Upstream 100 bases:
>100_bases AAAAAACGTAGCGGTCAATTAGGTGAATGTAGTTTTAATTTTTATAAACAAATCCAAAGATTTGAAGCAAAAGAATAAGA ATAAAAAAGGAAATAAAAAT
Downstream 100 bases:
>100_bases ATTAATTAGTTTTGAAGGTGTTGACGGAAGTGGCAAAACTACTTTAATTAATGAATTAAAAAAATATTTTGAAAATAAAG GCTATCAAATCAAAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKTKRIIAFNFKTCLRERYKQSIVEGQQLKKLDTRFGFYLLTNDESETQRLNNK IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVHPNDK
Sequences:
>Translated_210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKTKRIIAFNFKTCLRERYKQSIVEGQQLKKLDTRFGFYLLTNDESETQRLNNK IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVHPNDK >Mature_210_residues MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN HKGIKYLYPQSYLFFIPDIKFDLVLFTKTKRIIAFNFKTCLRERYKQSIVEGQQLKKLDTRFGFYLLTNDESETQRLNNK IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVHPNDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24926; Mature: 24926
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKTKRIIAFNFKTC HHHHHHHHHHCCEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH LRERYKQSIVEGQQLKKLDTRFGFYLLTNDESETQRLNNKIKNGKVQSINKVINLFSNSA HHHHHHHHHHCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHH NLFLQNLLTNQFIPFSPINLIKKMVHPNDK HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNS CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKTKRIIAFNFKTC HHHHHHHHHHCCEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH LRERYKQSIVEGQQLKKLDTRFGFYLLTNDESETQRLNNKIKNGKVQSINKVINLFSNSA HHHHHHHHHHCHHHHHHHHHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHH NLFLQNLLTNQFIPFSPINLIKKMVHPNDK HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA