| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294487
Identifier: 197294487
GI number: 197294487
Start: 422934
End: 423611
Strand: Reverse
Name: 197294487
Synonym: PAa_0421
Alternate gene names: NA
Gene position: 423611-422934 (Counterclockwise)
Preceding gene: 197294488
Following gene: 197294486
Centisome position: 48.14
GC content: 29.06
Gene sequence:
>678_bases ATGTATCGAGTTGATAGAAATAATTTTTTCAAAAATGAAAAAAAAGCTACTATTTATACTCCCAGTTGGGTATCGCAATT TTTATATAATATTTTATCACCTCAAATCCAACGCGTTTTAATCCTTGACCCTTGTGTTGGTGAAGGTTCTTTATTACTAC CTTGGCAACAAAAAGGATTTGATGTTTTAGGGGTTGATATAGAAAAAACAACCTTCCCTAATTTAATTCATAACAACTTT TTAGAATTAACCCAAAAGGATTTAAATACACAAAAAATATCCTTGGTAATTACAAACCCACCTTTTAATTTGGATTTTAA AACTAAAAACTACGTTAAGGAAAAATATGGTGGTCGTCCTTTGTTGCCTGAGTTGTGGTTAAGTAAAATAATTGAACTTT TTGGTAAAGATATCCCAATTGTTTTATTTACTCCTTATGGATTCAGACTTAATCAATCACTAAATAGCAAGCGATTACAG AAATTTTTAAATCAAGAATATCCCGAAATCTCTTCTATTATTAGTCTTCCCAAAGACGTTTTTGAAAACGTTGTTTTTCA TTCAGAAATTTTAATTTTTAACGTTAACCATTTAAAACCGCATTATTTCTGTGGAATAGCCACAAACCAAAATGACTACT TATTTATTAACTCGTCAAATTGGTTTATCCCAAAATAA
Upstream 100 bases:
>100_bases CCCTGCAAAAACTGTGGTAAATTTCAAACTATCAAAAACCCTCAAAGATGAAGTTAAAAACCTTAAATTAAAATAAAAAA AGAAAAGGAAAAATAAAAAA
Downstream 100 bases:
>100_bases AGTTCTCGATAAAGTTAATGATACAAGAAACCAAACCCAAGAACGATTCAATAAAACACATAAAAAACTGGATGAATTAA TAGAAAAACTTGATAAAGAA
Product: Putative N6 adenine-specific DNA methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MYRVDRNNFFKNEKKATIYTPSWVSQFLYNILSPQIQRVLILDPCVGEGSLLLPWQQKGFDVLGVDIEKTTFPNLIHNNF LELTQKDLNTQKISLVITNPPFNLDFKTKNYVKEKYGGRPLLPELWLSKIIELFGKDIPIVLFTPYGFRLNQSLNSKRLQ KFLNQEYPEISSIISLPKDVFENVVFHSEILIFNVNHLKPHYFCGIATNQNDYLFINSSNWFIPK
Sequences:
>Translated_225_residues MYRVDRNNFFKNEKKATIYTPSWVSQFLYNILSPQIQRVLILDPCVGEGSLLLPWQQKGFDVLGVDIEKTTFPNLIHNNF LELTQKDLNTQKISLVITNPPFNLDFKTKNYVKEKYGGRPLLPELWLSKIIELFGKDIPIVLFTPYGFRLNQSLNSKRLQ KFLNQEYPEISSIISLPKDVFENVVFHSEILIFNVNHLKPHYFCGIATNQNDYLFINSSNWFIPK >Mature_225_residues MYRVDRNNFFKNEKKATIYTPSWVSQFLYNILSPQIQRVLILDPCVGEGSLLLPWQQKGFDVLGVDIEKTTFPNLIHNNF LELTQKDLNTQKISLVITNPPFNLDFKTKNYVKEKYGGRPLLPELWLSKIIELFGKDIPIVLFTPYGFRLNQSLNSKRLQ KFLNQEYPEISSIISLPKDVFENVVFHSEILIFNVNHLKPHYFCGIATNQNDYLFINSSNWFIPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26336; Mature: 26336
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVDRNNFFKNEKKATIYTPSWVSQFLYNILSPQIQRVLILDPCVGEGSLLLPWQQKGF CEEECCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHCEEEEECCCCCCCCEEECCCCCCC DVLGVDIEKTTFPNLIHNNFLELTQKDLNTQKISLVITNPPFNLDFKTKNYVKEKYGGRP EEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHCCCCC LLPELWLSKIIELFGKDIPIVLFTPYGFRLNQSLNSKRLQKFLNQEYPEISSIISLPKDV CCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHCCHHH FENVVFHSEILIFNVNHLKPHYFCGIATNQNDYLFINSSNWFIPK HHHHHHHCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCC >Mature Secondary Structure MYRVDRNNFFKNEKKATIYTPSWVSQFLYNILSPQIQRVLILDPCVGEGSLLLPWQQKGF CEEECCCCCCCCCCCEEEECHHHHHHHHHHHHCHHHCEEEEECCCCCCCCEEECCCCCCC DVLGVDIEKTTFPNLIHNNFLELTQKDLNTQKISLVITNPPFNLDFKTKNYVKEKYGGRP EEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEECCHHHHHHHCCCCC LLPELWLSKIIELFGKDIPIVLFTPYGFRLNQSLNSKRLQKFLNQEYPEISSIISLPKDV CCHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCHHHHHHHHCCCCHHHHHHHHCCHHH FENVVFHSEILIFNVNHLKPHYFCGIATNQNDYLFINSSNWFIPK HHHHHHHCEEEEEEECCCCCEEEEEEEECCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA