| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294478
Identifier: 197294478
GI number: 197294478
Start: 409174
End: 409971
Strand: Reverse
Name: 197294478
Synonym: PAa_0407
Alternate gene names: NA
Gene position: 409971-409174 (Counterclockwise)
Preceding gene: 197294479
Following gene: 197294477
Centisome position: 46.59
GC content: 26.82
Gene sequence:
>798_bases ATGAAATCAAACAACAACACTAAAGTTAACGATTTATTTAAAAAAATTAATGATAATTTCCTTTCTTCTTCTGATACAAC CGATTACAAACGCAAAGCTTCACGCAAAGGTGTCGCTTTTAAAACAATTTTACTTTTATTAATCACCTCTTTTACTGCAG TAACTTTTTTTAGTCTTTTTAAAATGACTCAATTAAAGTTTCCTTACTTATGGATGATAAAAGTAATTTTTCTAACTTCA TCTTTTGCAACTAGCATATTTTATATCGCTGCAATGCTACGTGTAGAAATGTCGCGTCTGTGTTCTTGTCTTTTTGCTGT TCTAGAAGGATTGACAATAGGAATTTTTTTCCATTTCATTAATTGCATATATTCTAATTTATTAGAAATAGTTTTTATCG CACTTTTCTCAACTTTGATTATTTTTTGTGTAATGGCTCATGCTTATTATAAAGGTACTTTAAAAGTTACTCAAAGATTT ACAACAATTATGCAAAGAATTTCAATCGCTTTATTTTTCACTTATTTAATTCGTCTGTTTTTTGTTCTTTTTGGAGTGGG CACAATTGAAAATATTTTATATTACAGTATTTTGGTCATTCCTTTAAGTTTATTTATGTTAGGTTTTTTATCAATGTATT TAGCTATTCATTTTGATTATACTGAACAAATGATTCAACAAGGATTACCAGAAAAATATGAATGGCAAGTATCATTAGCT TTTGCCGCTACTTTAATTAGCATTTTTTTAAGAATTGTAAACCTTCTTTTAAGAATTATGGGAAAAGAAAAAGAATAA
Upstream 100 bases:
>100_bases ACACTCGGCAAACAACCGAAACACAAAAAAACCAAAAAAAATAATATATAAGTACACTTTAAAAAGTATAAAATTAAATT TATTATAGAGGTAACTTAAA
Downstream 100 bases:
>100_bases GACCGCTATTTTTAGCGGTCTTTTCTTGTAAAACCCCATTTCCTGGTGCACAGCATCACAAACATGCCAACAATTTCAGA TAATAAATCAGAAAGGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITSFTAVTFFSLFKMTQLKFPYLWMIKVIFLTS SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF TTIMQRISIALFFTYLIRLFFVLFGVGTIENILYYSILVIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA FAATLISIFLRIVNLLLRIMGKEKE
Sequences:
>Translated_265_residues MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITSFTAVTFFSLFKMTQLKFPYLWMIKVIFLTS SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF TTIMQRISIALFFTYLIRLFFVLFGVGTIENILYYSILVIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA FAATLISIFLRIVNLLLRIMGKEKE >Mature_265_residues MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITSFTAVTFFSLFKMTQLKFPYLWMIKVIFLTS SFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFINCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRF TTIMQRISIALFFTYLIRLFFVLFGVGTIENILYYSILVIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA FAATLISIFLRIVNLLLRIMGKEKE
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30720; Mature: 30720
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITSFTAVTFFSLF CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KMTQLKFPYLWMIKVIFLTSSFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRFTTIMQRISIALFFTYLIRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLFGVGTIENILYYSILVIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FAATLISIFLRIVNLLLRIMGKEKE HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKSNNNTKVNDLFKKINDNFLSSSDTTDYKRKASRKGVAFKTILLLLITSFTAVTFFSLF CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH KMTQLKFPYLWMIKVIFLTSSFATSIFYIAAMLRVEMSRLCSCLFAVLEGLTIGIFFHFI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NCIYSNLLEIVFIALFSTLIIFCVMAHAYYKGTLKVTQRFTTIMQRISIALFFTYLIRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLFGVGTIENILYYSILVIPLSLFMLGFLSMYLAIHFDYTEQMIQQGLPEKYEWQVSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH FAATLISIFLRIVNLLLRIMGKEKE HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA