| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294473
Identifier: 197294473
GI number: 197294473
Start: 406893
End: 407183
Strand: Reverse
Name: 197294473
Synonym: PAa_0402
Alternate gene names: NA
Gene position: 407183-406893 (Counterclockwise)
Preceding gene: 197294474
Following gene: 197294472
Centisome position: 46.27
GC content: 33.33
Gene sequence:
>291_bases ATGAATTTAGACAATAACCCAAAAGAAAGGAAAATTATGCAATTCAAACAATTTTTTCAAAAAATAAATAAAGACATTTT CTTAGGAACTATTTTAGTGATTCTTTTAACTTTAATCATCATTAAGGAAGCAAGAAGCTATAGCAATCCCCCACAAAACG AAAACAACACAATTAAAGTCGTCGTCGAACACAACCCTGAAACACACAGACCAACCAGAACAATCCATTACCGTGCAGAC GGCAAAACAATCGCCTCCATCACTGAATACGACAAAGAAAACAAACAATAA
Upstream 100 bases:
>100_bases CGTTCCAAACAAAAAAATAAAAAAACCAAAAAACAAAGAAACCAAAATAACAACACCTCAACGAAAACAAACAAAAATAA AAATTAAGGAGAACCAAAAC
Downstream 100 bases:
>100_bases GACTTTTTCAAAGGTCTTTTTTTCTAACCAAACCCACAACACAAACACGCTCGGCTAAAAAAAAATAAAAGGAGTTGATA ATTATGCAACCTAATAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MNLDNNPKERKIMQFKQFFQKINKDIFLGTILVILLTLIIIKEARSYSNPPQNENNTIKVVVEHNPETHRPTRTIHYRAD GKTIASITEYDKENKQ
Sequences:
>Translated_96_residues MNLDNNPKERKIMQFKQFFQKINKDIFLGTILVILLTLIIIKEARSYSNPPQNENNTIKVVVEHNPETHRPTRTIHYRAD GKTIASITEYDKENKQ >Mature_96_residues MNLDNNPKERKIMQFKQFFQKINKDIFLGTILVILLTLIIIKEARSYSNPPQNENNTIKVVVEHNPETHRPTRTIHYRAD GKTIASITEYDKENKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11295; Mature: 11295
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDNNPKERKIMQFKQFFQKINKDIFLGTILVILLTLIIIKEARSYSNPPQNENNTIKV CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE VVEHNPETHRPTRTIHYRADGKTIASITEYDKENKQ EECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure MNLDNNPKERKIMQFKQFFQKINKDIFLGTILVILLTLIIIKEARSYSNPPQNENNTIKV CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE VVEHNPETHRPTRTIHYRADGKTIASITEYDKENKQ EECCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA