| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294470
Identifier: 197294470
GI number: 197294470
Start: 404228
End: 404509
Strand: Reverse
Name: 197294470
Synonym: PAa_0398
Alternate gene names: NA
Gene position: 404509-404228 (Counterclockwise)
Preceding gene: 197294471
Following gene: 197294469
Centisome position: 45.97
GC content: 38.3
Gene sequence:
>282_bases TTGTCCAATCCATTCAAGACGTTAAACTGTATGAGAATAAACAAAACGACAGAAAGGAGAAAACTTATGACCCCACAATT TCGAAGAAATGCCACTTGGTTTTTTGCTATTTTAGCTTTATTGGGAATGATTTTTATAAGTTATAGATTATTCAACACCA ATAGAACACAAGACCCACAAGCAGGCGGCAGCGAAGCTTTGCATCACCAAACTCAAACAGAAGCTGAAAGAAAGGCAGCT GAAACAAACCAACCACAAGCCAACACAGGTTCACAAGAGTAA
Upstream 100 bases:
>100_bases TGAAAAAACTAAACAAGCAGTAATTGACAACCCCTTAATCAAACGTATTTCCCTCTTCAAAAACTTCTAATCGACAACAA TTTAAAAGTCATTTATTTCC
Downstream 100 bases:
>100_bases ACGCAAACGCAACAAGCGAACCAACCGCAAACAGAAACTAGACCATCTGAAGGCCGAAATCAAACAAATGCTAACAATTA AGTATCACATGATTCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALHHQTQTEAERKAA ETNQPQANTGSQE
Sequences:
>Translated_93_residues MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALHHQTQTEAERKAA ETNQPQANTGSQE >Mature_92_residues SNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALHHQTQTEAERKAAE TNQPQANTGSQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10704; Mature: 10573
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQ CCCCCCCEEEEECCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGGSEALHHQTQTEAERKAAETNQPQANTGSQE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQ CCCCCCEEEEECCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGGSEALHHQTQTEAERKAAETNQPQANTGSQE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA