| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294414
Identifier: 197294414
GI number: 197294414
Start: 348780
End: 349061
Strand: Direct
Name: 197294414
Synonym: PAa_0329
Alternate gene names: NA
Gene position: 348780-349061 (Clockwise)
Preceding gene: 197294413
Following gene: 197294415
Centisome position: 39.64
GC content: 38.65
Gene sequence:
>282_bases TTGTCCAATCCATTCAAGACGTTAAACTGTATGAGAATAAACAAAACGACAGAAAGGAGAAAACTTATGACCCCACAATT TCGAAGAAATGCCACTTGGTTTTTTGCTATTTTAGCTTTATTGGGAATGATTTTTATAAGTTATAGATTATTCAACACCA ATAGAACACAAGACCCACAAGCAGGCGGCAGCGAAGCTTTGCGTCACCAAACTCAAACAGAAGCTGAAAGAAAGGCAGCT GAAACAAACCAACCACAAGCCAACACAGGTTCACAAGAGTAA
Upstream 100 bases:
>100_bases TGAAAAAACTAAACAAGCAGTAATTGACAACCCCTTAATCAAACGTATTTCCCTCTTCAAAAACTTCTAATCGACAACAA TTTAAAAGTCATTTATTTCC
Downstream 100 bases:
>100_bases ACGCAAACGCAACAAGCGAACCAACCGCAAACAGAAACTAGACCATCTGAAGGCCGAAATCAAACAAATGCTAACAATTA AGTATCACATGATTCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALRHQTQTEAERKAA ETNQPQANTGSQE
Sequences:
>Translated_93_residues MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALRHQTQTEAERKAA ETNQPQANTGSQE >Mature_92_residues SNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQAGGSEALRHQTQTEAERKAAE TNQPQANTGSQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10723; Mature: 10592
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQ CCCCCCCCEEEECCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGGSEALRHQTQTEAERKAAETNQPQANTGSQE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNPFKTLNCMRINKTTERRKLMTPQFRRNATWFFAILALLGMIFISYRLFNTNRTQDPQ CCCCCCCEEEECCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AGGSEALRHQTQTEAERKAAETNQPQANTGSQE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA