| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294397
Identifier: 197294397
GI number: 197294397
Start: 336509
End: 337288
Strand: Reverse
Name: 197294397
Synonym: PAa_0310
Alternate gene names: NA
Gene position: 337288-336509 (Counterclockwise)
Preceding gene: 197294398
Following gene: 197294396
Centisome position: 38.33
GC content: 22.56
Gene sequence:
>780_bases ATGTTTAAAAAAAAAGAAAAATTACAATTATTGAAAATATTTTTATTCTTTTTTTTAGGATTAATCTTTATTACTAATAA TTCAGTGATGGCGATGAATAATTCAATTAATGAAGAAATCTCAGAAATTACAAAGAAGGAAGAAAATGAAGAAATAAAAA AAATTATAAGTTTACAAAAATTTTGCGCCTTACATGAAATGGGGCATGCTGTAGTTGCTTATGAGCTAAGTCAAAGACAT GGAACATATCTTATAAACCTTATAAAAATAGAATTAATTCAAGATAACAAAAATATTGTAGATGGTACTACCGAATTTGT ATTTGATAAAGAAGATCCTTTTGGTAATTTATTTGCGTTATCTGGTTTTTATGGAGGTTTAGAAGCGGAAAAAACAATTA AAATACCTATAGAAAATTTTAAAAACAGAGGCAATCATGATGAACAAGATATCGAAAGAATTGTTCAATATATTATAGAA AAAAGATGGTTTTTAGAAAATTTTTATTCATCAACGGATTCTTTAGAAACAAGAAAAGTTAAAATAAAAGATATTGCTCA ACAAAAAACACAAGAAATAATTAAACAATATGAAAAATTTTTATCGCCACTTGCTGATGAATTATTACAAAAACAAAATA TTACCAAAAGAGAATTTGAAGATTTACTAGAAAAATTAATAAATAAAAAAAATAATTCTCCAAAAAATACTCAAATAAAA GAAATTAATCAATCAAAATATAATATTAAAAACTCCAAATGTAATTGTTTCATTTTGTAA
Upstream 100 bases:
>100_bases GCTGAATTACAATATAAAAATGAAATCTTAAATTCTCTCCACAATCTTTACGAAATCTCCTCAGCTGAGGAATAAATAAT AACCAAAAGGAGTATTTATA
Downstream 100 bases:
>100_bases AAAATAACTTATCAAAACAAAAATATACAAACATTAATAAAAAAAAATAATTAAAAAAATATTATGAATCATCAATTAAA GAAATGTTTTTATCATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MFKKKEKLQLLKIFLFFFLGLIFITNNSVMAMNNSINEEISEITKKEENEEIKKIISLQKFCALHEMGHAVVAYELSQRH GTYLINLIKIELIQDNKNIVDGTTEFVFDKEDPFGNLFALSGFYGGLEAEKTIKIPIENFKNRGNHDEQDIERIVQYIIE KRWFLENFYSSTDSLETRKVKIKDIAQQKTQEIIKQYEKFLSPLADELLQKQNITKREFEDLLEKLINKKNNSPKNTQIK EINQSKYNIKNSKCNCFIL
Sequences:
>Translated_259_residues MFKKKEKLQLLKIFLFFFLGLIFITNNSVMAMNNSINEEISEITKKEENEEIKKIISLQKFCALHEMGHAVVAYELSQRH GTYLINLIKIELIQDNKNIVDGTTEFVFDKEDPFGNLFALSGFYGGLEAEKTIKIPIENFKNRGNHDEQDIERIVQYIIE KRWFLENFYSSTDSLETRKVKIKDIAQQKTQEIIKQYEKFLSPLADELLQKQNITKREFEDLLEKLINKKNNSPKNTQIK EINQSKYNIKNSKCNCFIL >Mature_259_residues MFKKKEKLQLLKIFLFFFLGLIFITNNSVMAMNNSINEEISEITKKEENEEIKKIISLQKFCALHEMGHAVVAYELSQRH GTYLINLIKIELIQDNKNIVDGTTEFVFDKEDPFGNLFALSGFYGGLEAEKTIKIPIENFKNRGNHDEQDIERIVQYIIE KRWFLENFYSSTDSLETRKVKIKDIAQQKTQEIIKQYEKFLSPLADELLQKQNITKREFEDLLEKLINKKNNSPKNTQIK EINQSKYNIKNSKCNCFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30476; Mature: 30476
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKKEKLQLLKIFLFFFLGLIFITNNSVMAMNNSINEEISEITKKEENEEIKKIISLQK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH FCALHEMGHAVVAYELSQRHGTYLINLIKIELIQDNKNIVDGTTEFVFDKEDPFGNLFAL HHHHHHHCCHHEEHHHHHCCCCEEEEEEEEEEEECCCCEECCCHHEEECCCCCCCCEEEE SGFYGGLEAEKTIKIPIENFKNRGNHDEQDIERIVQYIIEKRWFLENFYSSTDSLETRKV CCCCCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KIKDIAQQKTQEIIKQYEKFLSPLADELLQKQNITKREFEDLLEKLINKKNNSPKNTQIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHH EINQSKYNIKNSKCNCFIL HHHHHHCCCCCCCCCEEEC >Mature Secondary Structure MFKKKEKLQLLKIFLFFFLGLIFITNNSVMAMNNSINEEISEITKKEENEEIKKIISLQK CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHH FCALHEMGHAVVAYELSQRHGTYLINLIKIELIQDNKNIVDGTTEFVFDKEDPFGNLFAL HHHHHHHCCHHEEHHHHHCCCCEEEEEEEEEEEECCCCEECCCHHEEECCCCCCCCEEEE SGFYGGLEAEKTIKIPIENFKNRGNHDEQDIERIVQYIIEKRWFLENFYSSTDSLETRKV CCCCCCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH KIKDIAQQKTQEIIKQYEKFLSPLADELLQKQNITKREFEDLLEKLINKKNNSPKNTQIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHH EINQSKYNIKNSKCNCFIL HHHHHHCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA