| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294388
Identifier: 197294388
GI number: 197294388
Start: 317989
End: 318354
Strand: Direct
Name: 197294388
Synonym: PAa_0288
Alternate gene names: NA
Gene position: 317989-318354 (Clockwise)
Preceding gene: 197294387
Following gene: 197294401
Centisome position: 36.14
GC content: 21.31
Gene sequence:
>366_bases ATGTTAGCAAAAAATAAATTACATCTTTTACCATTCTTTTTAATTAGTTGTTTAGGATTATTATTTATCACAAGTAATAA TCAAGTTATGGCGATGGAAAACAACAACAAAGGTAAAACAATTATAAATAATGAACCAAGCGAAAAAGAGGTAAATGAAT TTTTTCAATTATTAAAAAGAACAAAAGAAAATATTTTTCAAATAAAACAAAAAAATCCTCATTTGAAAAATTTTTCTATA CGAGAAATAGAAGAATGGGCATGTTCTCCAAATAAACAACAACCAAAAAATAAAAGATTTAAAACAATTGATTTAAATAA AACTCCAGAAGAAGAATATTTAATAAATATTTTAAAACAACAATAA
Upstream 100 bases:
>100_bases TACCTTCACTTCAACCCAAAACAAAGATATATAACACTTTATACTAAGAAATTTAATACAAAAAATAATGAAAATAAATA AAAATAAGGAGTAATATATA
Downstream 100 bases:
>100_bases AATTTCTTAAAAAGATTTTATTGTTGTTTTTTTTAATTAAAACCAACTAAACAGTTTTTTTAACAATAAAGGCTTAAAAA AATAAAGTTACGTTAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MLAKNKLHLLPFFLISCLGLLFITSNNQVMAMENNNKGKTIINNEPSEKEVNEFFQLLKRTKENIFQIKQKNPHLKNFSI REIEEWACSPNKQQPKNKRFKTIDLNKTPEEEYLINILKQQ
Sequences:
>Translated_121_residues MLAKNKLHLLPFFLISCLGLLFITSNNQVMAMENNNKGKTIINNEPSEKEVNEFFQLLKRTKENIFQIKQKNPHLKNFSI REIEEWACSPNKQQPKNKRFKTIDLNKTPEEEYLINILKQQ >Mature_121_residues MLAKNKLHLLPFFLISCLGLLFITSNNQVMAMENNNKGKTIINNEPSEKEVNEFFQLLKRTKENIFQIKQKNPHLKNFSI REIEEWACSPNKQQPKNKRFKTIDLNKTPEEEYLINILKQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14332; Mature: 14332
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKNKLHLLPFFLISCLGLLFITSNNQVMAMENNNKGKTIINNEPSEKEVNEFFQLLKR CCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHH TKENIFQIKQKNPHLKNFSIREIEEWACSPNKQQPKNKRFKTIDLNKTPEEEYLINILKQ HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC Q C >Mature Secondary Structure MLAKNKLHLLPFFLISCLGLLFITSNNQVMAMENNNKGKTIINNEPSEKEVNEFFQLLKR CCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHH TKENIFQIKQKNPHLKNFSIREIEEWACSPNKQQPKNKRFKTIDLNKTPEEEYLINILKQ HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA