| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294387
Identifier: 197294387
GI number: 197294387
Start: 311736
End: 312251
Strand: Direct
Name: 197294387
Synonym: PAa_0283
Alternate gene names: NA
Gene position: 311736-312251 (Clockwise)
Preceding gene: 197294380
Following gene: 197294388
Centisome position: 35.43
GC content: 35.47
Gene sequence:
>516_bases GTGGACGAATATGTCTTTGAAACAAGCGATGGAAAACATTTAATTATGAAATCTTCTACTTCTGTCGGCTTTTTGAAAAC TACAATAACCCCTAAAATTCCACCAAATACCAAAACAGAAGCTATTTATTTTGTTGATGGCATACGCCTTCTTCCTCTAG AATATGAAAGCTACACCATCGAAGATTTAATCAAGCTATCAAACGGTGCTAAACATGTTTATCTTTTCTCCTTCAAAATC CCAAAAGAAAAAATAAACATTACACTCCCTGATGCCCTAGACCCTCTCGAAGCCATTAAAACCTGGAAAAAAGAACATAA TTTATCTAATTATGGTGGGGCAACACGCTCCTACGAGGGCGAACTGGGCCTAACCGAATACACAACAAAATACAATCATA TTGAAAACGATTTTGAAACAGAAGACAAAATTTATCACATCACCTGTGAAAACTCCAAACAAAAAGCAAAAATTATAGAG GATTACGTGAGAGCACTCCACTATTATCTTTATTGA
Upstream 100 bases:
>100_bases ATTATAATATTTATCGCAAAATGAAAGTCCTAAATTATTTATCACCAATGGATTTCAAGCACCTTTCCCTATAGGAGAAT TCAAAAGCGACTCAATAGCT
Downstream 100 bases:
>100_bases CGAAATTAGTGGCATGGCTAACCGTGAAGACAAAAATTCTAATAAAACAAGTATTAATATTGTTAATAATATTTTAACTA AATTAGATGGTTTTAACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MDEYVFETSDGKHLIMKSSTSVGFLKTTITPKIPPNTKTEAIYFVDGIRLLPLEYESYTIEDLIKLSNGAKHVYLFSFKI PKEKINITLPDALDPLEAIKTWKKEHNLSNYGGATRSYEGELGLTEYTTKYNHIENDFETEDKIYHITCENSKQKAKIIE DYVRALHYYLY
Sequences:
>Translated_171_residues MDEYVFETSDGKHLIMKSSTSVGFLKTTITPKIPPNTKTEAIYFVDGIRLLPLEYESYTIEDLIKLSNGAKHVYLFSFKI PKEKINITLPDALDPLEAIKTWKKEHNLSNYGGATRSYEGELGLTEYTTKYNHIENDFETEDKIYHITCENSKQKAKIIE DYVRALHYYLY >Mature_171_residues MDEYVFETSDGKHLIMKSSTSVGFLKTTITPKIPPNTKTEAIYFVDGIRLLPLEYESYTIEDLIKLSNGAKHVYLFSFKI PKEKINITLPDALDPLEAIKTWKKEHNLSNYGGATRSYEGELGLTEYTTKYNHIENDFETEDKIYHITCENSKQKAKIIE DYVRALHYYLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19847; Mature: 19847
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEYVFETSDGKHLIMKSSTSVGFLKTTITPKIPPNTKTEAIYFVDGIRLLPLEYESYTI CCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCH EDLIKLSNGAKHVYLFSFKIPKEKINITLPDALDPLEAIKTWKKEHNLSNYGGATRSYEG HHHHHHCCCCCEEEEEEEECCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC ELGLTEYTTKYNHIENDFETEDKIYHITCENSKQKAKIIEDYVRALHYYLY CCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDEYVFETSDGKHLIMKSSTSVGFLKTTITPKIPPNTKTEAIYFVDGIRLLPLEYESYTI CCCEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCH EDLIKLSNGAKHVYLFSFKIPKEKINITLPDALDPLEAIKTWKKEHNLSNYGGATRSYEG HHHHHHCCCCCEEEEEEEECCHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC ELGLTEYTTKYNHIENDFETEDKIYHITCENSKQKAKIIEDYVRALHYYLY CCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA