| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is spoVG
Identifier: 197294382
GI number: 197294382
Start: 301174
End: 301464
Strand: Reverse
Name: spoVG
Synonym: PAa_0271
Alternate gene names: 197294382
Gene position: 301464-301174 (Counterclockwise)
Preceding gene: 197294383
Following gene: 197294381
Centisome position: 34.26
GC content: 31.27
Gene sequence:
>291_bases ATGAAAGTTACTGATGTAAAAATTAGAAAAATTAACGGAGAAAGCAGATTAAGAGGAGTTGCATCAATTGCTTTTGATGA TTGCTTTGTTGTTAATGATATTAGAATTATAGAAGGCGAAAAAGGTATTTTCATCGCTATGCCAAGCAGAAAAACTACTA AAGGCACTTTTAGAGATATTGCGCATCCCGTGAATACAGAAACTCGTCAAGTAATTGAAGAGAGTATTTTAACTAAATAT CAAGATGTTTTAAATAATCCTGTTGAAGACAAACCAGAACAAGAGAATTAA
Upstream 100 bases:
>100_bases TGTTAAAATGACAAGTAGTTTAAAGTATTTTATAGCTATTAAATTATGAAAACAATTAAGAAAATTTCAGAAGATAAATC AAATTATGGAGGCTTAAAAG
Downstream 100 bases:
>100_bases TTTTTTTTGATTAAAATTCTTATGAAAAAACAATAAAATTATAAATAATTAATTGAAAGGTGTTATAAATTTGAATGTCA ATAACGAAAAAACAAATCAA
Product: regulatory protein SpoVG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKVTDVKIRKINGESRLRGVASIAFDDCFVVNDIRIIEGEKGIFIAMPSRKTTKGTFRDIAHPVNTETRQVIEESILTKY QDVLNNPVEDKPEQEN
Sequences:
>Translated_96_residues MKVTDVKIRKINGESRLRGVASIAFDDCFVVNDIRIIEGEKGIFIAMPSRKTTKGTFRDIAHPVNTETRQVIEESILTKY QDVLNNPVEDKPEQEN >Mature_96_residues MKVTDVKIRKINGESRLRGVASIAFDDCFVVNDIRIIEGEKGIFIAMPSRKTTKGTFRDIAHPVNTETRQVIEESILTKY QDVLNNPVEDKPEQEN
Specific function: Could be involved in septation
COG id: COG2088
COG function: function code M; Uncharacterized protein, involved in the regulation of septum location
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spoVG family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SP5G_PHYAS (B1V9I4)
Other databases:
- EMBL: AM422018 - RefSeq: YP_001798923.1 - ProteinModelPortal: B1V9I4 - SMR: B1V9I4 - GeneID: 6799288 - GenomeReviews: AM422018_GR - HOGENOM: HBG288253 - OMA: QITDVRI - ProtClustDB: PRK13259 - HAMAP: MF_00819 - InterPro: IPR007170
Pfam domain/function: PF04026 SpoVG
EC number: NA
Molecular weight: Translated: 10919; Mature: 10919
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTDVKIRKINGESRLRGVASIAFDDCFVVNDIRIIEGEKGIFIAMPSRKTTKGTFRDI CCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEEECCCCCCCCHHHHH AHPVNTETRQVIEESILTKYQDVLNNPVEDKPEQEN CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKVTDVKIRKINGESRLRGVASIAFDDCFVVNDIRIIEGEKGIFIAMPSRKTTKGTFRDI CCCCCEEEEEECCHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEEECCCCCCCCHHHHH AHPVNTETRQVIEESILTKYQDVLNNPVEDKPEQEN CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA