| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294376
Identifier: 197294376
GI number: 197294376
Start: 293082
End: 293402
Strand: Direct
Name: 197294376
Synonym: PAa_0263
Alternate gene names: NA
Gene position: 293082-293402 (Clockwise)
Preceding gene: 197294363
Following gene: 197294380
Centisome position: 33.31
GC content: 15.89
Gene sequence:
>321_bases ATGTTTAAATTACAAAATCAATTAAAAATAATAAGTATTTGTTTATTAGCTTTTTTAGGAATGTTATTAATAAATAATAA TCAAGTTATGGCGATGGAAAATAATAATTTAGAAGAAAAAGAAATTAATTTTTCAAAAAATAAAAAGAAATTAAATTTTA TATCAGAACATTACAAATATACAAATAAAAACCAAAAAATAAAATTTAAAAAAATATTAATTGATAATGAGCCTGAAAAA AAACTTTTAAAAACAAATAAACAAGCAAAAAAACAAAAGACAAAAAAAATATTAAATTTGAATACTATCCCAGAAGAATA A
Upstream 100 bases:
>100_bases TCTTCACTTCAACCCAAAACAAAGATATATCACACTTTACACTAAGAAATTTAATACAAAAAATAATTAAAATAAATAAA AATAAGGAGTTTAGTAATTA
Downstream 100 bases:
>100_bases TAATTTAATTAATATTTTAAAACAACAATAAAACTTCTTAAAAGATTTTATTGTTGTTTTTTCAATTTTTGCAAAATAAC TAAACAGTTTTTTTAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMENNNLEEKEINFSKNKKKLNFISEHYKYTNKNQKIKFKKILIDNEPEK KLLKTNKQAKKQKTKKILNLNTIPEE
Sequences:
>Translated_106_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMENNNLEEKEINFSKNKKKLNFISEHYKYTNKNQKIKFKKILIDNEPEK KLLKTNKQAKKQKTKKILNLNTIPEE >Mature_106_residues MFKLQNQLKIISICLLAFLGMLLINNNQVMAMENNNLEEKEINFSKNKKKLNFISEHYKYTNKNQKIKFKKILIDNEPEK KLLKTNKQAKKQKTKKILNLNTIPEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12595; Mature: 12595
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKLQNQLKIISICLLAFLGMLLINNNQVMAMENNNLEEKEINFSKNKKKLNFISEHYKY CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHH TNKNQKIKFKKILIDNEPEKKLLKTNKQAKKQKTKKILNLNTIPEE CCCCCEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFKLQNQLKIISICLLAFLGMLLINNNQVMAMENNNLEEKEINFSKNKKKLNFISEHYKY CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHH TNKNQKIKFKKILIDNEPEKKLLKTNKQAKKQKTKKILNLNTIPEE CCCCCEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA