| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is gepA
Identifier: 197294372
GI number: 197294372
Start: 285639
End: 286127
Strand: Reverse
Name: gepA
Synonym: PAa_0252
Alternate gene names: NA
Gene position: 286127-285639 (Counterclockwise)
Preceding gene: 197294373
Following gene: 197294371
Centisome position: 32.52
GC content: 25.36
Gene sequence:
>489_bases ATGAAAAATAATAATCAAATCAACGTTTTTGATGTCGTTCATTATATGGTTTTTGAAAAAAATATCAAAGCTTCTAATTT AACTTTAAATAAATTAGTTTATTACAGTTATGCTAAATATCTAATTGATAATAATACTCTAGCAGATATTCAAAATAATA ATTATCAAAAACTTATCCCTAATTATTGTCAAGCTTGGGTTTATGGACCTGTTTTTTACGAATTGTATCGCGGTATCAAA CAATATCTTAAAAGACAAATTGTCAATATTCCTAAAATCACTGGTTTTCCTTTAACAGAAAAACAAAAATCAGCTATTGA ATATGCCACTAATAAATATGGCAATTGGCATCCATGGGATTTAGTTGCAAAAACTCACATGGAAGATCCTTGGAAAAAAA ATATTGATTTAACTATGGCATATCCTAAAAGAATCATTACTGATGAGTCTATTTTTAATTTTTATTTTCACAATAAAATG GAATTATAA
Upstream 100 bases:
>100_bases ATGAATAATAAAAAAAATTTATCTATTTTTTTTAATGAAATTTATAAAGAAACAATTGAAAATTAACCAAGAAATAAATA CAAAAAGGAGGTAAATAATT
Downstream 100 bases:
>100_bases TCTTTTTTTATTTTATTAAAAAAAAGAAAGTTGGTTTAAAAAAATGCAATCCTTAAAAAAATTTAAAATATTTTTATATA TAATTATTATTTATCTTTCA
Product: phage-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKNNNQINVFDVVHYMVFEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIPNYCQAWVYGPVFYELYRGIK QYLKRQIVNIPKITGFPLTEKQKSAIEYATNKYGNWHPWDLVAKTHMEDPWKKNIDLTMAYPKRIITDESIFNFYFHNKM EL
Sequences:
>Translated_162_residues MKNNNQINVFDVVHYMVFEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIPNYCQAWVYGPVFYELYRGIK QYLKRQIVNIPKITGFPLTEKQKSAIEYATNKYGNWHPWDLVAKTHMEDPWKKNIDLTMAYPKRIITDESIFNFYFHNKM EL >Mature_162_residues MKNNNQINVFDVVHYMVFEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIPNYCQAWVYGPVFYELYRGIK QYLKRQIVNIPKITGFPLTEKQKSAIEYATNKYGNWHPWDLVAKTHMEDPWKKNIDLTMAYPKRIITDESIFNFYFHNKM EL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19439; Mature: 19439
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNNQINVFDVVHYMVFEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIP CCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH NYCQAWVYGPVFYELYRGIKQYLKRQIVNIPKITGFPLTEKQKSAIEYATNKYGNWHPWD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH LVAKTHMEDPWKKNIDLTMAYPKRIITDESIFNFYFHNKMEL HHHHHCCCCCCCCCCCEEEECCHHHHCCHHHHHHHCCCCCCC >Mature Secondary Structure MKNNNQINVFDVVHYMVFEKNIKASNLTLNKLVYYSYAKYLIDNNTLADIQNNNYQKLIP CCCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH NYCQAWVYGPVFYELYRGIKQYLKRQIVNIPKITGFPLTEKQKSAIEYATNKYGNWHPWD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHH LVAKTHMEDPWKKNIDLTMAYPKRIITDESIFNFYFHNKMEL HHHHHCCCCCCCCCCCEEEECCHHHHCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA