| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294362
Identifier: 197294362
GI number: 197294362
Start: 280279
End: 280647
Strand: Reverse
Name: 197294362
Synonym: PAa_0241
Alternate gene names: NA
Gene position: 280647-280279 (Counterclockwise)
Preceding gene: 197294364
Following gene: 197294349
Centisome position: 31.89
GC content: 32.25
Gene sequence:
>369_bases ATGAATAATTACCCAAACTATCCAACCCCATTTCCGCAAAAAAACAACAAACTTCTTTACTCCATTATTGCAATTGTTTC TGTTGTATTCGTTATTTTTGCAATAATTTTCTTCTATAATAAAACTAAACCCTCAACTAATAACCAAAACTCCGAACACC AAGAAACCCCAAATAACAGGAATACCTCAAGAAAACCAAACTCTCAACAAAAACACACACCACGTCCTGAAAATCCTAGA CAAATCAGAACTGCAGAAAATCCATCTGAATTTTCGGATGATGATTTTTTACCACCTTTTGATTTAGAACCTCAGGATGA AGAATTTAATACAAATGCTTCAAACCCTCAATTTTATACAAATACTTAA
Upstream 100 bases:
>100_bases CTTTTTTTATATCCTTTCCGTTTTCTTTGCAAAAAAAAAAAAAACGGTATAATGGAATTGTATTATTTTTCCATTATACT TAATTAGAAAGGATTTAAAT
Downstream 100 bases:
>100_bases AAACCTTCTTCTTCTCCACAATCACCAACAACCCCTCAATCTGGTAAGCTCCACGAAAATGGTACTATTTGAAAACAACA TTTTTTTCCAAAAAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSVVFVIFAIIFFYNKTKPSTNNQNSEHQETPNNRNTSRKPNSQQKHTPRPENPR QIRTAENPSEFSDDDFLPPFDLEPQDEEFNTNASNPQFYTNT
Sequences:
>Translated_122_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSVVFVIFAIIFFYNKTKPSTNNQNSEHQETPNNRNTSRKPNSQQKHTPRPENPR QIRTAENPSEFSDDDFLPPFDLEPQDEEFNTNASNPQFYTNT >Mature_122_residues MNNYPNYPTPFPQKNNKLLYSIIAIVSVVFVIFAIIFFYNKTKPSTNNQNSEHQETPNNRNTSRKPNSQQKHTPRPENPR QIRTAENPSEFSDDDFLPPFDLEPQDEEFNTNASNPQFYTNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14240; Mature: 14240
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYPNYPTPFPQKNNKLLYSIIAIVSVVFVIFAIIFFYNKTKPSTNNQNSEHQETPNNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NTSRKPNSQQKHTPRPENPRQIRTAENPSEFSDDDFLPPFDLEPQDEEFNTNASNPQFYT CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE NT CC >Mature Secondary Structure MNNYPNYPTPFPQKNNKLLYSIIAIVSVVFVIFAIIFFYNKTKPSTNNQNSEHQETPNNR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NTSRKPNSQQKHTPRPENPRQIRTAENPSEFSDDDFLPPFDLEPQDEEFNTNASNPQFYT CCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE NT CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA