| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294348
Identifier: 197294348
GI number: 197294348
Start: 263870
End: 264577
Strand: Reverse
Name: 197294348
Synonym: PAa_0223
Alternate gene names: NA
Gene position: 264577-263870 (Counterclockwise)
Preceding gene: 197294349
Following gene: 197294347
Centisome position: 30.07
GC content: 24.58
Gene sequence:
>708_bases TTGGTTGCTGATGAACACGCCCAAAATTATTTTTTCCAAGCTTTAGGGATTGCTTTATTAATTTCTATTATATCAGGTAT TTTATCATGTTTTCTTTTTAATTTCAGTTGGATAACAGCACCACTTTTTAGTCTTTCTTTTGGAGGATTTTTAGGCATTC TTTCAAATATGTTCAAATATGCATCCCGTTATTCAAAAGAATTACAAGGAGAATATGTTGTTTTTCTTGGTATTAGTATT ATTTTATTCTTTCTCATAAGTAATTTTTTGATTACTCTTTTACTTTATTATAAAAAATTTCGTAAACAAGAAAACCAAGA TATAATAAATAAATTTGGTTTTGTAATATTTAATTTTTTTATTGTTACAACCATTTATGCATTTTTATTTTTCTTACTTT TTATTGCTTTTGGTGAAGAAATCAAAATTTTTAAAAATGTTTGGGCTATTATTGGCTTATTATTTTTTAGCGGTCTTGTT GCAAGTAGTTCTATTTTTATTGCAAGCGCTTTATGCATTTTTGATGTTATAACTAAAAAAACAAATAGATTCCAAATATC AAAATTCTTTGGCTTTTATTTTATTTATAATTGTATTTTATCCCATCTTGAAAATGTTTTTTTAGAACGTTTCGCAAAAA AAATTAATTTTAAGAGATGTTGTTTTTACTTGCGAAAACAACAATTAAACAGCCTTAACATCAGCTGA
Upstream 100 bases:
>100_bases TTTTTTCTTGCATCTTTTGTAATTTCTTTTTTTTCTTTTTAAATCAGAATTATTATTTAAAATCAACAAAATACAACGTT CCTACGGGGAACAATCGGTA
Downstream 100 bases:
>100_bases AAGGACTTTGAAACAAATGAACATAACAAAAATAAAAGAAAGGCAAAAAAGAATTCGTAATTTTTCCATCATTGCTCACA TTGACCATGGAAAATCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MVADEHAQNYFFQALGIALLISIISGILSCFLFNFSWITAPLFSLSFGGFLGILSNMFKYASRYSKELQGEYVVFLGISI ILFFLISNFLITLLLYYKKFRKQENQDIINKFGFVIFNFFIVTTIYAFLFFLLFIAFGEEIKIFKNVWAIIGLLFFSGLV ASSSIFIASALCIFDVITKKTNRFQISKFFGFYFIYNCILSHLENVFLERFAKKINFKRCCFYLRKQQLNSLNIS
Sequences:
>Translated_235_residues MVADEHAQNYFFQALGIALLISIISGILSCFLFNFSWITAPLFSLSFGGFLGILSNMFKYASRYSKELQGEYVVFLGISI ILFFLISNFLITLLLYYKKFRKQENQDIINKFGFVIFNFFIVTTIYAFLFFLLFIAFGEEIKIFKNVWAIIGLLFFSGLV ASSSIFIASALCIFDVITKKTNRFQISKFFGFYFIYNCILSHLENVFLERFAKKINFKRCCFYLRKQQLNSLNIS >Mature_235_residues MVADEHAQNYFFQALGIALLISIISGILSCFLFNFSWITAPLFSLSFGGFLGILSNMFKYASRYSKELQGEYVVFLGISI ILFFLISNFLITLLLYYKKFRKQENQDIINKFGFVIFNFFIVTTIYAFLFFLLFIAFGEEIKIFKNVWAIIGLLFFSGLV ASSSIFIASALCIFDVITKKTNRFQISKFFGFYFIYNCILSHLENVFLERFAKKINFKRCCFYLRKQQLNSLNIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27377; Mature: 27377
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADEHAQNYFFQALGIALLISIISGILSCFLFNFSWITAPLFSLSFGGFLGILSNMFKY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRYSKELQGEYVVFLGISIILFFLISNFLITLLLYYKKFRKQENQDIINKFGFVIFNFF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IVTTIYAFLFFLLFIAFGEEIKIFKNVWAIIGLLFFSGLVASSSIFIASALCIFDVITKK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TNRFQISKFFGFYFIYNCILSHLENVFLERFAKKINFKRCCFYLRKQQLNSLNIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVADEHAQNYFFQALGIALLISIISGILSCFLFNFSWITAPLFSLSFGGFLGILSNMFKY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRYSKELQGEYVVFLGISIILFFLISNFLITLLLYYKKFRKQENQDIINKFGFVIFNFF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IVTTIYAFLFFLLFIAFGEEIKIFKNVWAIIGLLFFSGLVASSSIFIASALCIFDVITKK HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TNRFQISKFFGFYFIYNCILSHLENVFLERFAKKINFKRCCFYLRKQQLNSLNIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA