| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294334
Identifier: 197294334
GI number: 197294334
Start: 242931
End: 244013
Strand: Direct
Name: 197294334
Synonym: PAa_0205
Alternate gene names: NA
Gene position: 242931-244013 (Clockwise)
Preceding gene: 197294333
Following gene: 197294335
Centisome position: 27.61
GC content: 28.81
Gene sequence:
>1083_bases ATGGAGTTATTTAAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGTCCTTTATTGATTTGGTTTGT TCAAAAACACGTAAATAATAAATTAAACAATGTAGAAAATATTAAATTACAAATTGAAATTGAGACAATAACTAAACAAG AAAAATTAAACCAAAAAATATCTGAGTTAGTAAATAATAAAGCTTTATCAGTTCAAGAAAAAACTGAATTACAAGAAGAA ATAAATACTATTCAAACTGAATTAAACCAAAAACAAGCAGAATTATCACATAATCAAATGTTGATAGGACAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATTGTTTTATAATAAGTATAATTGCTATTTTCG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTTCTGAACCGAAAGTA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTACCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC ACCTTGTTTTGGGCCACCAAATGATTAAAGTAAAATACACTTTCTACGGCCTCAACGGCCTTGGTCGTGGAAAGCACCGT GAATACGAGCCAACTGATATAATGCCGTTTATGAAAAACCCTTTTGACAAATGGGAAGTAAAAGATAGCAGGATTGATTT TTTTGATACTTTCCATACAAAAAATAAAGGGGATGGGTCATATTTCGGTGATATAAATTTTGGAAACAACTATGTAGACC ACTACATGTACCTCAACTACAAAGGCCCAAAATGGTTAATTGAAGAAGATAAAGACTTCTTCATGGATGAAGTACAATGT CATATAACAAACCCCAAAGATTCTAGATATCCCAAAGATAAAATGAAAAATTACTACCTTCACTTCAACCCAAAACAAAG ATATATCACGCTTTACACTAAGAAATTTAATACAAAAAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTGGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases TAAATATTTTAAAACAACAATAAAATTTCTTAAAAAGATTTTATTGTTGTTTTTTTTAATTAAAACCAACTAAACAGTTT TTTTAACAATAAAGGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKISELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHTKNKGDGSYFGDINFGNNYVDHYMYLNYKGPKWLIEEDKDFFMDEVQC HITNPKDSRYPKDKMKNYYLHFNPKQRYITLYTKKFNTKN
Sequences:
>Translated_360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKISELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHTKNKGDGSYFGDINFGNNYVDHYMYLNYKGPKWLIEEDKDFFMDEVQC HITNPKDSRYPKDKMKNYYLHFNPKQRYITLYTKKFNTKN >Mature_360_residues MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKISELVNNKALSVQEKTELQEE INTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAIIIYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTISEPKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHTKNKGDGSYFGDINFGNNYVDHYMYLNYKGPKWLIEEDKDFFMDEVQC HITNPKDSRYPKDKMKNYYLHFNPKQRYITLYTKKFNTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42588; Mature: 42588
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH SELVNNKALSVQEKTELQEEINTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHH IYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHTKNKGDGSYFGDINFGNNYVDHYMYLNY CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEEE KGPKWLIEEDKDFFMDEVQCHITNPKDSRYPKDKMKNYYLHFNPKQRYITLYTKKFNTKN CCCEEEECCCCHHHCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWFVQKHVNNKLNNVENIKLQIEIETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHHHHH SELVNNKALSVQEKTELQEEINTIQTELNQKQAELSHNQMLIGQLKAKKYTKRNPIKAII HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCHHHHH IYYCFIISIIAIFGGFIFLDNKYDITNSKPKTYTISEPKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEECCCCEEECHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNHLVLGHQMIKVKYTFYGLNGLGRGKHR EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECEEEEEEEEEEEECCCCCCCCCC EYEPTDIMPFMKNPFDKWEVKDSRIDFFDTFHTKNKGDGSYFGDINFGNNYVDHYMYLNY CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCEEEEEEEEEE KGPKWLIEEDKDFFMDEVQCHITNPKDSRYPKDKMKNYYLHFNPKQRYITLYTKKFNTKN CCCEEEECCCCHHHCCCEEEEECCCCCCCCCHHHHCCEEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA