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The map label for this gene is rplI [H]

Identifier: 197294286

GI number: 197294286

Start: 178070

End: 180568

Strand: Reverse

Name: rplI [H]

Synonym: PAa_0149

Alternate gene names: 197294286

Gene position: 180568-178070 (Counterclockwise)

Preceding gene: 197294287

Following gene: 197294285

Centisome position: 20.52

GC content: 27.73

Gene sequence:

>2499_bases
ATGTCTCTTAAAAAAAATGTCAAATTAGTAATGGCTATTGTAATTGTTGTTTTATTTTTATTATTTTTACGCTATGATTA
TGACAATATATCTAAAGTTATTCAACAAATAGATAAAACATCTGACAATCTGTTAAAAGCCCGTCTTTGGGCTGCATTTG
GTTTGGGAAAAATTATTTTAATTATTTTAATCATTAGCTTTGTATTACAGATTAAAAAAAATAATAAAATCAAACGTTTA
CAAGCCAAATTAAATTTATGGTCAAAATTATCTTTCCATGTGAGCCAAATTGGCGAAGAAGTTCTAAATGAACTTCCAAT
TGGAATTGTCTTAATTGATGTAAACAACAAAGAAATACAATGGTTGAATCCTTATGCTAATTTGATTTTAAAAAATCCTG
AAATCAATACCCCTTTAAGTCAAATCAATGAATCAATGTTGTTGTTGACCGAACAAGAAACAGAAAAAACAATCATTACT
TTAGAAAAAGAAAAATTTGAATGTTTTTATAAAAAAGATTTAAACGTTTTTTATTTATTTAACGCTAGCGAAAAAGAAGA
AGTCAAACAATTATTTAGAGATAAATCTTTGGCTTTAGCCATGATTACTTTTGATCATTTAGAAGAATCATTGATTCGTT
ATGATATTTCTGAACAATCACAAATTAAAGGGGAATATTTAAGAGCGCTATCTGATTTTATTGATCCTTATGAAGGATAT
TTAAAACAGTTATTAGATGACCGTTTTTTATTGCTTGTAAATCGTCAAAACTTAGATAAAATGATAGAAAATAAATTTAG
TATTTTAGATACCGTCAGAAAAATATCTCATAAATATCAATTAAAAGTCACTCTTTCAATGGGAATTGCTTGTTGGAATG
TGTCTTATGATAAATTGGCTATTTATAGTCAAAACGCGATTGAATTAGCTCAAAAAAGAGGTGGAGACCAAGCGGTTGTT
AACATTGAAAATGAAAAAATTCAATATTTTGGTGCCAAAATTGCTACTTTAAGCAAACAATCAAAAGTTAGTGTTCGCGT
AAATACTCAAAATTTAGTTGATATAATTAAAAAATATCCTGGTTTTTATATTATGGGACATAATTACACTGATCTAGATT
CTTTGGGTTCTATGATTGCTTTTTATAAAATAGTTTTAAGTTTAAAACCTGATTGTCCTAATTATATTATTCTTGACAAA
GAAAAGTTAGATAAAAGCCTTCTTCCTGTTTATCATCAATTGATTCAACAAACAACAAAACCACTAGTCGAGATTATAAC
AACTGAAAAAGCCGCAAAAATGATTGATGAAAATGATGTGATTGTGGTAGTTGATACTCAAATTAAAGATACGTTGAATA
GCCCTGAATTATTGGGTTTAACTAATAATGTGATTGTTATTGACCATCATCGTGCGACAGAAGAAGTTGTTCCTTCTATT
TTTTCTTATGTTGATCCTTCCGCTTCTTCAACTGTAGAATTATTAGTTGAAATTATGGGTTTTTTAACGGAAGAAATAAA
AATTGCTCCTTTTGAAGCCAGTGTTATGTATGCAGGCATTTTAATTGATACTAACGCTTTTATTTATCGCACTAGCTCGC
GAACTTTTGAAGTTATTTTAAAATTAAAAGATTTCGGCGCTGATGGAATTGAAGTTAAAAGTTGGTTACGAAAAACTCGG
GATAATGTTGATTCAACGAATGCATTAATTTCTAAAATGGAAATTTTTATGGGTCGTTTTGCTATCATCAAAAGTGATAA
AATTTATGATAATCGTTCTTTTTTAGCTCAAGTGGCAGAAGATGCTTTAAACATTAGTGGGATTGATGCTGCTTTTATGG
TTGCAAAAATTTCTAACAATAGAATAGCAATTAGCGCTCGTTCTTATAATCAAGTTAACGTACAAACTATTATGGAACAA
ATGGAAGGTGGAGGTCATTTCAATAGTGCTGCTACCCAAATTACAGGCAACGATATTCAAATAGTAATTCAAAACTTAAA
ACGTTTATTAAAGTTAGAATTAGAATATGAAAAAGGAGATGCACAAATGGAAATCATTTTATTAACAGATATCCCTAACA
AAGGAAAAAAACACGATATTATTAAAGTTAATAATGGTTATGGGAATTTTTTAATTCAAAGTCAAAAAGCACTTTTATCT
GATAAAAACAATTTAGCTCAAATCCGCAAAAATGAAATTTTAGAAAAACAAAAAAAAGCAAATTATGAAGCTTTAATGAA
AAAACTAAAAAACGAAATCGACAATAAAACAATTTCTTTAGATATTCAAGTAGGACCTAAAGGAAAAATTTACGGCAAAA
TAACTTTAAAGCAAATTGCTGATGAATTTAAAAAAATACACCACATCATAATTGATCGTAAAAAAATTTCCTTGGAAAAT
GAAATTACTTCTGTAGGTATTTATCATATTGATGTCAATTTAACCGAACAAATTAAGGCTACTTTTTTTCTCAACGTAAT
TGAAAGAAAAAATAAATGA

Upstream 100 bases:

>100_bases
AAAAACAGGCGTAATCCTGTTTTTTTTATTAATTTTTTTTATACTTGACAATATTTTGCTTTTGCAAATTTGGATTTAAA
AAAAAGAAAGGCAATAATTT

Downstream 100 bases:

>100_bases
GTGAATATAACAAAAAAAAGCCTTATAGCCCCGAAGCAGAGCAGGCTTTACTAGGGGTTTTATTATTAAACCCCGAAAAA
GTACCTTTTGTTCTTGATTT

Product: putative bifunctional signaling protein/50S ribosomal protein L9

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 832; Mature: 831

Protein sequence:

>832_residues
MSLKKNVKLVMAIVIVVLFLLFLRYDYDNISKVIQQIDKTSDNLLKARLWAAFGLGKIILIILIISFVLQIKKNNKIKRL
QAKLNLWSKLSFHVSQIGEEVLNELPIGIVLIDVNNKEIQWLNPYANLILKNPEINTPLSQINESMLLLTEQETEKTIIT
LEKEKFECFYKKDLNVFYLFNASEKEEVKQLFRDKSLALAMITFDHLEESLIRYDISEQSQIKGEYLRALSDFIDPYEGY
LKQLLDDRFLLLVNRQNLDKMIENKFSILDTVRKISHKYQLKVTLSMGIACWNVSYDKLAIYSQNAIELAQKRGGDQAVV
NIENEKIQYFGAKIATLSKQSKVSVRVNTQNLVDIIKKYPGFYIMGHNYTDLDSLGSMIAFYKIVLSLKPDCPNYIILDK
EKLDKSLLPVYHQLIQQTTKPLVEIITTEKAAKMIDENDVIVVVDTQIKDTLNSPELLGLTNNVIVIDHHRATEEVVPSI
FSYVDPSASSTVELLVEIMGFLTEEIKIAPFEASVMYAGILIDTNAFIYRTSSRTFEVILKLKDFGADGIEVKSWLRKTR
DNVDSTNALISKMEIFMGRFAIIKSDKIYDNRSFLAQVAEDALNISGIDAAFMVAKISNNRIAISARSYNQVNVQTIMEQ
MEGGGHFNSAATQITGNDIQIVIQNLKRLLKLELEYEKGDAQMEIILLTDIPNKGKKHDIIKVNNGYGNFLIQSQKALLS
DKNNLAQIRKNEILEKQKKANYEALMKKLKNEIDNKTISLDIQVGPKGKIYGKITLKQIADEFKKIHHIIIDRKKISLEN
EITSVGIYHIDVNLTEQIKATFFLNVIERKNK

Sequences:

>Translated_832_residues
MSLKKNVKLVMAIVIVVLFLLFLRYDYDNISKVIQQIDKTSDNLLKARLWAAFGLGKIILIILIISFVLQIKKNNKIKRL
QAKLNLWSKLSFHVSQIGEEVLNELPIGIVLIDVNNKEIQWLNPYANLILKNPEINTPLSQINESMLLLTEQETEKTIIT
LEKEKFECFYKKDLNVFYLFNASEKEEVKQLFRDKSLALAMITFDHLEESLIRYDISEQSQIKGEYLRALSDFIDPYEGY
LKQLLDDRFLLLVNRQNLDKMIENKFSILDTVRKISHKYQLKVTLSMGIACWNVSYDKLAIYSQNAIELAQKRGGDQAVV
NIENEKIQYFGAKIATLSKQSKVSVRVNTQNLVDIIKKYPGFYIMGHNYTDLDSLGSMIAFYKIVLSLKPDCPNYIILDK
EKLDKSLLPVYHQLIQQTTKPLVEIITTEKAAKMIDENDVIVVVDTQIKDTLNSPELLGLTNNVIVIDHHRATEEVVPSI
FSYVDPSASSTVELLVEIMGFLTEEIKIAPFEASVMYAGILIDTNAFIYRTSSRTFEVILKLKDFGADGIEVKSWLRKTR
DNVDSTNALISKMEIFMGRFAIIKSDKIYDNRSFLAQVAEDALNISGIDAAFMVAKISNNRIAISARSYNQVNVQTIMEQ
MEGGGHFNSAATQITGNDIQIVIQNLKRLLKLELEYEKGDAQMEIILLTDIPNKGKKHDIIKVNNGYGNFLIQSQKALLS
DKNNLAQIRKNEILEKQKKANYEALMKKLKNEIDNKTISLDIQVGPKGKIYGKITLKQIADEFKKIHHIIIDRKKISLEN
EITSVGIYHIDVNLTEQIKATFFLNVIERKNK
>Mature_831_residues
SLKKNVKLVMAIVIVVLFLLFLRYDYDNISKVIQQIDKTSDNLLKARLWAAFGLGKIILIILIISFVLQIKKNNKIKRLQ
AKLNLWSKLSFHVSQIGEEVLNELPIGIVLIDVNNKEIQWLNPYANLILKNPEINTPLSQINESMLLLTEQETEKTIITL
EKEKFECFYKKDLNVFYLFNASEKEEVKQLFRDKSLALAMITFDHLEESLIRYDISEQSQIKGEYLRALSDFIDPYEGYL
KQLLDDRFLLLVNRQNLDKMIENKFSILDTVRKISHKYQLKVTLSMGIACWNVSYDKLAIYSQNAIELAQKRGGDQAVVN
IENEKIQYFGAKIATLSKQSKVSVRVNTQNLVDIIKKYPGFYIMGHNYTDLDSLGSMIAFYKIVLSLKPDCPNYIILDKE
KLDKSLLPVYHQLIQQTTKPLVEIITTEKAAKMIDENDVIVVVDTQIKDTLNSPELLGLTNNVIVIDHHRATEEVVPSIF
SYVDPSASSTVELLVEIMGFLTEEIKIAPFEASVMYAGILIDTNAFIYRTSSRTFEVILKLKDFGADGIEVKSWLRKTRD
NVDSTNALISKMEIFMGRFAIIKSDKIYDNRSFLAQVAEDALNISGIDAAFMVAKISNNRIAISARSYNQVNVQTIMEQM
EGGGHFNSAATQITGNDIQIVIQNLKRLLKLELEYEKGDAQMEIILLTDIPNKGKKHDIIKVNNGYGNFLIQSQKALLSD
KNNLAQIRKNEILEKQKKANYEALMKKLKNEIDNKTISLDIQVGPKGKIYGKITLKQIADEFKKIHHIIIDRKKISLENE
ITSVGIYHIDVNLTEQIKATFFLNVIERKNK

Specific function: Binds to the 23S rRNA [H]

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L9P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR009027
- InterPro:   IPR020594
- InterPro:   IPR020069
- InterPro:   IPR020070 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF03948 Ribosomal_L9_C; PF01281 Ribosomal_L9_N [H]

EC number: NA

Molecular weight: Translated: 95089; Mature: 94958

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKKNVKLVMAIVIVVLFLLFLRYDYDNISKVIQQIDKTSDNLLKARLWAAFGLGKIIL
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IILIISFVLQIKKNNKIKRLQAKLNLWSKLSFHVSQIGEEVLNELPIGIVLIDVNNKEIQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE
WLNPYANLILKNPEINTPLSQINESMLLLTEQETEKTIITLEKEKFECFYKKDLNVFYLF
EECHHHHEEECCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHEECCCCEEEEE
NASEKEEVKQLFRDKSLALAMITFDHLEESLIRYDISEQSQIKGEYLRALSDFIDPYEGY
CCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH
LKQLLDDRFLLLVNRQNLDKMIENKFSILDTVRKISHKYQLKVTLSMGIACWNVSYDKLA
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECEEEEECCCCEEE
IYSQNAIELAQKRGGDQAVVNIENEKIQYFGAKIATLSKQSKVSVRVNTQNLVDIIKKYP
EECCHHHHHHHHCCCCEEEEEECCCEEEECCCHHEEECCCCEEEEEECHHHHHHHHHHCC
GFYIMGHNYTDLDSLGSMIAFYKIVLSLKPDCPNYIILDKEKLDKSLLPVYHQLIQQTTK
CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHH
PLVEIITTEKAAKMIDENDVIVVVDTQIKDTLNSPELLGLTNNVIVIDHHRATEEVVPSI
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEECCCEEEEECCCCHHHHHHHH
FSYVDPSASSTVELLVEIMGFLTEEIKIAPFEASVMYAGILIDTNAFIYRTSSRTFEVIL
HHHCCCCCCHHHHHHHHHHHHHHHCCEECCEECCEEEEEEEEECCEEEEEECCCEEEEEE
KLKDFGADGIEVKSWLRKTRDNVDSTNALISKMEIFMGRFAIIKSDKIYDNRSFLAQVAE
EEHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
DALNISGIDAAFMVAKISNNRIAISARSYNQVNVQTIMEQMEGGGHFNSAATQITGNDIQ
HHCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHH
IVIQNLKRLLKLELEYEKGDAQMEIILLTDIPNKGKKHDIIKVNNGYGNFLIQSQKALLS
HHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCHHHHC
DKNNLAQIRKNEILEKQKKANYEALMKKLKNEIDNKTISLDIQVGPKGKIYGKITLKQIA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEHHHHH
DEFKKIHHIIIDRKKISLENEITSVGIYHIDVNLTEQIKATFFLNVIERKNK
HHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLKKNVKLVMAIVIVVLFLLFLRYDYDNISKVIQQIDKTSDNLLKARLWAAFGLGKIIL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IILIISFVLQIKKNNKIKRLQAKLNLWSKLSFHVSQIGEEVLNELPIGIVLIDVNNKEIQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEE
WLNPYANLILKNPEINTPLSQINESMLLLTEQETEKTIITLEKEKFECFYKKDLNVFYLF
EECHHHHEEECCCCCCCCHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHEECCCCEEEEE
NASEKEEVKQLFRDKSLALAMITFDHLEESLIRYDISEQSQIKGEYLRALSDFIDPYEGY
CCCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHH
LKQLLDDRFLLLVNRQNLDKMIENKFSILDTVRKISHKYQLKVTLSMGIACWNVSYDKLA
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECEEEEECCCCEEE
IYSQNAIELAQKRGGDQAVVNIENEKIQYFGAKIATLSKQSKVSVRVNTQNLVDIIKKYP
EECCHHHHHHHHCCCCEEEEEECCCEEEECCCHHEEECCCCEEEEEECHHHHHHHHHHCC
GFYIMGHNYTDLDSLGSMIAFYKIVLSLKPDCPNYIILDKEKLDKSLLPVYHQLIQQTTK
CEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCHHHHHHHHHHHHHHHH
PLVEIITTEKAAKMIDENDVIVVVDTQIKDTLNSPELLGLTNNVIVIDHHRATEEVVPSI
HHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCEEEECCCEEEEECCCCHHHHHHHH
FSYVDPSASSTVELLVEIMGFLTEEIKIAPFEASVMYAGILIDTNAFIYRTSSRTFEVIL
HHHCCCCCCHHHHHHHHHHHHHHHCCEECCEECCEEEEEEEEECCEEEEEECCCEEEEEE
KLKDFGADGIEVKSWLRKTRDNVDSTNALISKMEIFMGRFAIIKSDKIYDNRSFLAQVAE
EEHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHH
DALNISGIDAAFMVAKISNNRIAISARSYNQVNVQTIMEQMEGGGHFNSAATQITGNDIQ
HHCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHH
IVIQNLKRLLKLELEYEKGDAQMEIILLTDIPNKGKKHDIIKVNNGYGNFLIQSQKALLS
HHHHHHHHHHEEEEEECCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCHHHHC
DKNNLAQIRKNEILEKQKKANYEALMKKLKNEIDNKTISLDIQVGPKGKIYGKITLKQIA
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEHHHHH
DEFKKIHHIIIDRKKISLENEITSVGIYHIDVNLTEQIKATFFLNVIERKNK
HHHHHHHHHHHCCHHCCCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA