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The map label for this gene is rpoZ

Identifier: 197294244

GI number: 197294244

Start: 115717

End: 115923

Strand: Direct

Name: rpoZ

Synonym: PAa_0106

Alternate gene names: NA

Gene position: 115717-115923 (Clockwise)

Preceding gene: 197294243

Following gene: 197294245

Centisome position: 13.15

GC content: 23.67

Gene sequence:

>207_bases
ATGAATAAAGAAGGTTTAAGTTATCCTTCGATTGATAAATTATTAGATAAAGTTGATTCTAAATATAAATTAGTTCATAT
AGCTAGTAAAATAGCTCATGTTATAGAAAAAGACAAGATATCATTGCCTGAATGCAAATCTGAAAAAGTAATTGGTAAAG
CTTTAGAAGAAATTATTAACGATAAAGCTAAATTTGTCTTTAAATAA

Upstream 100 bases:

>100_bases
ATTATTGCAATTATTAGAGCGGAACATGCAAAAACTAAACGTAGTATTCGTAATTATTTAAAGATTTTGGAGAATGATGG
TTATGCCGAACAATAAACAA

Downstream 100 bases:

>100_bases
AATAATTAAATAAAACTGTTAAATTACAATGAGAATTGCATAATTTAACTTTTTTTATTTTGTGTAAATTGAAAAGGAGC
TGTTTACAATGACTTTGAGG

Product: Putative DNA-directed RNA polymerase,omega subunit

Products: NA

Alternate protein names: DNA-Directed RNA Polymerase Subunit Omega; DNA-Directed RNA Polymerase Omega Subunit

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MNKEGLSYPSIDKLLDKVDSKYKLVHIASKIAHVIEKDKISLPECKSEKVIGKALEEIINDKAKFVFK

Sequences:

>Translated_68_residues
MNKEGLSYPSIDKLLDKVDSKYKLVHIASKIAHVIEKDKISLPECKSEKVIGKALEEIINDKAKFVFK
>Mature_68_residues
MNKEGLSYPSIDKLLDKVDSKYKLVHIASKIAHVIEKDKISLPECKSEKVIGKALEEIINDKAKFVFK

Specific function: Unknown

COG id: COG1758

COG function: function code K; DNA-directed RNA polymerase, subunit K/omega

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7715; Mature: 7715

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEGLSYPSIDKLLDKVDSKYKLVHIASKIAHVIEKDKISLPECKSEKVIGKALEEIIN
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
DKAKFVFK
HHHHHCCC
>Mature Secondary Structure
MNKEGLSYPSIDKLLDKVDSKYKLVHIASKIAHVIEKDKISLPECKSEKVIGKALEEIIN
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
DKAKFVFK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA