The gene/protein map for NC_010544 is currently unavailable.
Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is 197294229

Identifier: 197294229

GI number: 197294229

Start: 94880

End: 95308

Strand: Direct

Name: 197294229

Synonym: PAa_0087

Alternate gene names: NA

Gene position: 94880-95308 (Clockwise)

Preceding gene: 197294228

Following gene: 197294230

Centisome position: 10.78

GC content: 28.9

Gene sequence:

>429_bases
ATGATTGTTTTTCAAACTACTACTTATTTCAACCCTTATTTAAATGATTTATGTTTTTTTGAAGAAAAAAGCGGAACTAC
TAAAAAGCTTGTTTCGGCTTTAGAACCAAGCCAAGGTCAATCAGGACCTAAAGATTTATTTTGTCTTTCTTGGGCAATTT
GTTTGTATAGAACTACTCACAAATTTCTAGATTTAAAAGGACATAAAAATCCAGAAATCAAAGTTAAAGTGACTTTAGAA
ATGTTAAAAGATGAAAGAGGTTTTTATTTTAAACCAACTGCAATTTTGGCAATCAAAGGTATGTCTTTGGAAGAAACAGA
AACAATTTTAAAAACTGTTGACTACAAATGTCCTATTTCACGTTTAATTAGCAATGACCCTCATGTTCAAGTTAAAGTTG
CTTCTTATGATGAATTAATTACTCAATAA

Upstream 100 bases:

>100_bases
ATACTAACTAAAAACAAAACTCCAATATTTAATTTTGTGGAGTGTTTAGGATTTAGTTTAAAGATAAATAATAAATATAT
AAGAAAAGGAAATGTTAAAA

Downstream 100 bases:

>100_bases
ATATAATAAAAAACAAAAAAACCTTGACTATTAAAGAAAATTTTTATAAAATACTAATGATGGTAAAAACAGTTATAATT
AGCCCTATTAAACTAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIVFQTTTYFNPYLNDLCFFEEKSGTTKKLVSALEPSQGQSGPKDLFCLSWAICLYRTTHKFLDLKGHKNPEIKVKVTLE
MLKDERGFYFKPTAILAIKGMSLEETETILKTVDYKCPISRLISNDPHVQVKVASYDELITQ

Sequences:

>Translated_142_residues
MIVFQTTTYFNPYLNDLCFFEEKSGTTKKLVSALEPSQGQSGPKDLFCLSWAICLYRTTHKFLDLKGHKNPEIKVKVTLE
MLKDERGFYFKPTAILAIKGMSLEETETILKTVDYKCPISRLISNDPHVQVKVASYDELITQ
>Mature_142_residues
MIVFQTTTYFNPYLNDLCFFEEKSGTTKKLVSALEPSQGQSGPKDLFCLSWAICLYRTTHKFLDLKGHKNPEIKVKVTLE
MLKDERGFYFKPTAILAIKGMSLEETETILKTVDYKCPISRLISNDPHVQVKVASYDELITQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16261; Mature: 16261

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFQTTTYFNPYLNDLCFFEEKSGTTKKLVSALEPSQGQSGPKDLFCLSWAICLYRTTH
CEEEEEECCCCHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
KFLDLKGHKNPEIKVKVTLEMLKDERGFYFKPTAILAIKGMSLEETETILKTVDYKCPIS
HHEECCCCCCCCEEEEEEEEEHHCCCCCEECCEEEEEEECCCCHHHHHHHHHCCCCCCHH
RLISNDPHVQVKVASYDELITQ
HHHCCCCCEEEEEECHHHHHCC
>Mature Secondary Structure
MIVFQTTTYFNPYLNDLCFFEEKSGTTKKLVSALEPSQGQSGPKDLFCLSWAICLYRTTH
CEEEEEECCCCHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
KFLDLKGHKNPEIKVKVTLEMLKDERGFYFKPTAILAIKGMSLEETETILKTVDYKCPIS
HHEECCCCCCCCEEEEEEEEEHHCCCCCEECCEEEEEEECCCCHHHHHHHHHCCCCCCHH
RLISNDPHVQVKVASYDELITQ
HHHCCCCCEEEEEECHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA