| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is folA [H]
Identifier: 197294227
GI number: 197294227
Start: 93356
End: 93853
Strand: Direct
Name: folA [H]
Synonym: PAa_0085
Alternate gene names: 197294227
Gene position: 93356-93853 (Clockwise)
Preceding gene: 197294226
Following gene: 197294228
Centisome position: 10.61
GC content: 26.1
Gene sequence:
>498_bases ATGATTAATTTAATCACAGCTTTTGATAGTAATTATCTAATAGGAAGCGATAATAAACTTCCTTGGCATTATCCTCAAGA TTTGCATTTTTTTAAAAAAACAACTTTGAATCAAGAAGTTTTAATGGGTCATCAAACTTATCTTTCGTTAAAAAGTTATT TCAAAGACAAGCCTTTTAATTTTAAAAAAACTTATGTTGCCGCTCGAAATAAAGGTTTGCAATTGGATGGTTGTGAAGTG GTTTTTGATTTGTTAACTTTTTTAAAAACTTTTTTAATTCAGAAAAAATCGCATCTTTTTGTTATTGGAGGTAGACAAAT TTATCAACAAAGTTTGCCGTTTGTGGATAATTTATATATTACTTATATTTTAAATAGACATAAAGGGAATGTTTATTTTC CTCCAGTCAATTGGCAAGATTTTCAATTAATTCAAAAAACGATTCAACCTCAATTAATTTTTGCTTTTTATAAAAGGAAA AAGGATCCATTATGTTAA
Upstream 100 bases:
>100_bases TTTTAAACCCTCATATTAAAGATATTGATGGCTTTTCATTTGAAGATTTTACTTTAAAAAATTATTTTTGCGATGGAACT TTGAAAGGAGATATTGCTAT
Downstream 100 bases:
>100_bases TTGTCTTTTTTTTCACTATGATTGTTTCTAATTTTTTTTATTTGAAACATTTTTATTTGAATAACCCTATTATAATTTTT CTTTTATCCTTAATAATGGC
Product: Dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MINLITAFDSNYLIGSDNKLPWHYPQDLHFFKKTTLNQEVLMGHQTYLSLKSYFKDKPFNFKKTYVAARNKGLQLDGCEV VFDLLTFLKTFLIQKKSHLFVIGGRQIYQQSLPFVDNLYITYILNRHKGNVYFPPVNWQDFQLIQKTIQPQLIFAFYKRK KDPLC
Sequences:
>Translated_165_residues MINLITAFDSNYLIGSDNKLPWHYPQDLHFFKKTTLNQEVLMGHQTYLSLKSYFKDKPFNFKKTYVAARNKGLQLDGCEV VFDLLTFLKTFLIQKKSHLFVIGGRQIYQQSLPFVDNLYITYILNRHKGNVYFPPVNWQDFQLIQKTIQPQLIFAFYKRK KDPLC >Mature_165_residues MINLITAFDSNYLIGSDNKLPWHYPQDLHFFKKTTLNQEVLMGHQTYLSLKSYFKDKPFNFKKTYVAARNKGLQLDGCEV VFDLLTFLKTFLIQKKSHLFVIGGRQIYQQSLPFVDNLYITYILNRHKGNVYFPPVNWQDFQLIQKTIQPQLIFAFYKRK KDPLC
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Escherichia coli, GI1786233, Length=147, Percent_Identity=31.2925170068027, Blast_Score=84, Evalue=6e-18,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19596; Mature: 19596
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLITAFDSNYLIGSDNKLPWHYPQDLHFFKKTTLNQEVLMGHQTYLSLKSYFKDKPFN CCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC FKKTYVAARNKGLQLDGCEVVFDLLTFLKTFLIQKKSHLFVIGGRQIYQQSLPFVDNLYI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHCEEE TYILNRHKGNVYFPPVNWQDFQLIQKTIQPQLIFAFYKRKKDPLC EEEEECCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MINLITAFDSNYLIGSDNKLPWHYPQDLHFFKKTTLNQEVLMGHQTYLSLKSYFKDKPFN CCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC FKKTYVAARNKGLQLDGCEVVFDLLTFLKTFLIQKKSHLFVIGGRQIYQQSLPFVDNLYI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHCEEE TYILNRHKGNVYFPPVNWQDFQLIQKTIQPQLIFAFYKRKKDPLC EEEEECCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]