| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is pykA [H]
Identifier: 197294211
GI number: 197294211
Start: 66465
End: 67820
Strand: Direct
Name: pykA [H]
Synonym: PAa_0061
Alternate gene names: 197294211
Gene position: 66465-67820 (Clockwise)
Preceding gene: 197294210
Following gene: 197294221
Centisome position: 7.55
GC content: 30.46
Gene sequence:
>1356_bases ATGAATAAAACTAAAATAGTGTGCACTTTAGGACCTGCTTGTCGCGACAAAGAAACTTTAAAACAATTAGTAAAAAATGG TCTTAATGTTGCTCGTTTTAATTTTTCTCACGCTGATTATCAAAACAGCGAAGAAACTTTAAAGATGATTCAAGAAATTA ACCAAGAATTAAATACTTATGTAGCAACTATGCTAGACACTAAAGGACCAGAAATTAGAACTCATAATTTTGCAAAACCA GTGGAAATCAAACAAAACTCTGAAGTAAGAATCGCTTTTACAGAAGTTTTAGGAACTGAAAAAAAATTTTCTATCAGTTA TGAACAACTTTATGATGATGTTACAACTAGTGATTTAATTTTTATTGATGATGGTTATTTAACTTTAGAAGTAGTTGCCA AAGATGAACAAAACAAAGAATTAATTACAAAAGCTAACAACACTCATTTAGTTAAATCCCGTAGAGGCGTTAATGTTCCC AACATTAAATTAAAAATGCCTTATATCTCTGAAAAAGATGCTCGCGATATTGCTTTTGCTTGTGAAAAAAAATATGATTT TTTAGCACTTTCTTTTGTTAGAAATGCTTCAGATGTTTTGGAAGTAAGAAAAATCTTAAAAGAAAAGCAAAACGATACTA TTAAAATAATCGCTAAAATAGAAAACCAAGAAGGAATAGATAATTTAGAAGAAATTCTTCTTGTTGTTGACGGCATTATG GTTGCTCGTGGTGATTTAGGAATTGAAGTACCGGGAGAACTTGTTCCTTTATATCAAACTCAAATGATTCAAGAATGTCT TTGTGCCGGTAAACCTGTTATTGTGGCTACTCAAATGCTTGAATCAATGCAAAGAAACCCTCGCCCTACTAAAGCAGAAA TTAGTGATGTTTGGAACGCAGTTTTACAAGGCACTACAGCAACTATGTTATCAGGCGAATCGGCATCAGGACTTTATCCT GAAAAGTCAGTTTCTTATATGGCAAAAATTAATCATAAAGCCGAAGAGTATCTTGATTATGATTTAATTTCTAATTTTTA TGATCCTCAAAATAGAGTTGAATATCTAGCTTTTAGTGTTATCCAAATGGCTTTAAAAGACCAAATTCATGCAATTGTTA TTGAAGATGATCTTGCTTATGGTTATGCTTTTGCTAAATTTCGCTCCAAAGTGCCAGTTTTTGTTAAAGTAAAAGATTTA AAATCAAGTACAACTTTGGCATTAAATTTTTCCAATTTCCCTTTCTTAACTGAGGCGGAATTAATGACTAAATTAAACCT TTTGAAAAGTGAAAATCAAAATAATTTAGTTTTTGCTGTCATTAAAAAAGATTCCTTAACCTTAAAGAATTTTTAA
Upstream 100 bases:
>100_bases AACCCCCAGAAATGACAGGAATAAGTTTAATCGAAAAAACAAATAAAACTTCAAAATAAGGATGAAAAAATGAATAAAAC TTCAAAATAAGGATGAAAAA
Downstream 100 bases:
>100_bases TTAATTGCTTGCTCACTTTTTATAACTTGTGCTTGCTTTTAGCAAAATTTATAAAAACTTTTTTACTTTTAAAAAAAATT AGGACCAAGAGGTCTTACGA
Product: Pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MNKTKIVCTLGPACRDKETLKQLVKNGLNVARFNFSHADYQNSEETLKMIQEINQELNTYVATMLDTKGPEIRTHNFAKP VEIKQNSEVRIAFTEVLGTEKKFSISYEQLYDDVTTSDLIFIDDGYLTLEVVAKDEQNKELITKANNTHLVKSRRGVNVP NIKLKMPYISEKDARDIAFACEKKYDFLALSFVRNASDVLEVRKILKEKQNDTIKIIAKIENQEGIDNLEEILLVVDGIM VARGDLGIEVPGELVPLYQTQMIQECLCAGKPVIVATQMLESMQRNPRPTKAEISDVWNAVLQGTTATMLSGESASGLYP EKSVSYMAKINHKAEEYLDYDLISNFYDPQNRVEYLAFSVIQMALKDQIHAIVIEDDLAYGYAFAKFRSKVPVFVKVKDL KSSTTLALNFSNFPFLTEAELMTKLNLLKSENQNNLVFAVIKKDSLTLKNF
Sequences:
>Translated_451_residues MNKTKIVCTLGPACRDKETLKQLVKNGLNVARFNFSHADYQNSEETLKMIQEINQELNTYVATMLDTKGPEIRTHNFAKP VEIKQNSEVRIAFTEVLGTEKKFSISYEQLYDDVTTSDLIFIDDGYLTLEVVAKDEQNKELITKANNTHLVKSRRGVNVP NIKLKMPYISEKDARDIAFACEKKYDFLALSFVRNASDVLEVRKILKEKQNDTIKIIAKIENQEGIDNLEEILLVVDGIM VARGDLGIEVPGELVPLYQTQMIQECLCAGKPVIVATQMLESMQRNPRPTKAEISDVWNAVLQGTTATMLSGESASGLYP EKSVSYMAKINHKAEEYLDYDLISNFYDPQNRVEYLAFSVIQMALKDQIHAIVIEDDLAYGYAFAKFRSKVPVFVKVKDL KSSTTLALNFSNFPFLTEAELMTKLNLLKSENQNNLVFAVIKKDSLTLKNF >Mature_451_residues MNKTKIVCTLGPACRDKETLKQLVKNGLNVARFNFSHADYQNSEETLKMIQEINQELNTYVATMLDTKGPEIRTHNFAKP VEIKQNSEVRIAFTEVLGTEKKFSISYEQLYDDVTTSDLIFIDDGYLTLEVVAKDEQNKELITKANNTHLVKSRRGVNVP NIKLKMPYISEKDARDIAFACEKKYDFLALSFVRNASDVLEVRKILKEKQNDTIKIIAKIENQEGIDNLEEILLVVDGIM VARGDLGIEVPGELVPLYQTQMIQECLCAGKPVIVATQMLESMQRNPRPTKAEISDVWNAVLQGTTATMLSGESASGLYP EKSVSYMAKINHKAEEYLDYDLISNFYDPQNRVEYLAFSVIQMALKDQIHAIVIEDDLAYGYAFAKFRSKVPVFVKVKDL KSSTTLALNFSNFPFLTEAELMTKLNLLKSENQNNLVFAVIKKDSLTLKNF
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=435, Percent_Identity=40, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI33286420, Length=435, Percent_Identity=40, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI33286418, Length=438, Percent_Identity=40.1826484018265, Blast_Score=288, Evalue=6e-78, Organism=Homo sapiens, GI10835121, Length=434, Percent_Identity=38.0184331797235, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI32967597, Length=434, Percent_Identity=38.0184331797235, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=43.9446366782007, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=43.9446366782007, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=40.084388185654, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=40.084388185654, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI310128738, Length=218, Percent_Identity=38.0733944954128, Blast_Score=136, Evalue=4e-32, Organism=Escherichia coli, GI1787965, Length=345, Percent_Identity=44.0579710144928, Blast_Score=302, Evalue=3e-83, Organism=Escherichia coli, GI1788160, Length=405, Percent_Identity=33.8271604938272, Blast_Score=208, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17544584, Length=424, Percent_Identity=38.9150943396226, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71984413, Length=345, Percent_Identity=43.1884057971014, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI17506829, Length=345, Percent_Identity=43.1884057971014, Blast_Score=265, Evalue=3e-71, Organism=Caenorhabditis elegans, GI71984406, Length=345, Percent_Identity=43.1884057971014, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17506831, Length=436, Percent_Identity=37.3853211009174, Blast_Score=265, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6319279, Length=441, Percent_Identity=37.18820861678, Blast_Score=262, Evalue=8e-71, Organism=Saccharomyces cerevisiae, GI6324923, Length=432, Percent_Identity=37.2685185185185, Blast_Score=256, Evalue=4e-69, Organism=Drosophila melanogaster, GI24648964, Length=353, Percent_Identity=43.9093484419263, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI28571814, Length=353, Percent_Identity=43.9093484419263, Blast_Score=277, Evalue=1e-74, Organism=Drosophila melanogaster, GI24648966, Length=432, Percent_Identity=34.0277777777778, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI24581235, Length=431, Percent_Identity=30.3944315545244, Blast_Score=204, Evalue=8e-53, Organism=Drosophila melanogaster, GI24646914, Length=320, Percent_Identity=32.1875, Blast_Score=158, Evalue=6e-39,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51077; Mature: 51077
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTKIVCTLGPACRDKETLKQLVKNGLNVARFNFSHADYQNSEETLKMIQEINQELNTY CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH VATMLDTKGPEIRTHNFAKPVEIKQNSEVRIAFTEVLGTEKKFSISYEQLYDDVTTSDLI HHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHCCCCEEEEEHHHHHCCCCCCCEE FIDDGYLTLEVVAKDEQNKELITKANNTHLVKSRRGVNVPNIKLKMPYISEKDARDIAFA EEECCEEEEEEEECCCCCCHHHEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCHHHHH CEKKYDFLALSFVRNASDVLEVRKILKEKQNDTIKIIAKIENQEGIDNLEEILLVVDGIM HHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH VARGDLGIEVPGELVPLYQTQMIQECLCAGKPVIVATQMLESMQRNPRPTKAEISDVWNA EECCCCCEECCCCEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLQGTTATMLSGESASGLYPEKSVSYMAKINHKAEEYLDYDLISNFYDPQNRVEYLAFSV HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IQMALKDQIHAIVIEDDLAYGYAFAKFRSKVPVFVKVKDLKSSTTLALNFSNFPFLTEAE HHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEHHH LMTKLNLLKSENQNNLVFAVIKKDSLTLKNF HHHHHHHHHCCCCCCEEEEEEECCCEECCCC >Mature Secondary Structure MNKTKIVCTLGPACRDKETLKQLVKNGLNVARFNFSHADYQNSEETLKMIQEINQELNTY CCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH VATMLDTKGPEIRTHNFAKPVEIKQNSEVRIAFTEVLGTEKKFSISYEQLYDDVTTSDLI HHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEHHHHCCCCEEEEEHHHHHCCCCCCCEE FIDDGYLTLEVVAKDEQNKELITKANNTHLVKSRRGVNVPNIKLKMPYISEKDARDIAFA EEECCEEEEEEEECCCCCCHHHEECCCCEEEECCCCCCCCCEEEECCCCCCCCCCHHHHH CEKKYDFLALSFVRNASDVLEVRKILKEKQNDTIKIIAKIENQEGIDNLEEILLVVDGIM HHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH VARGDLGIEVPGELVPLYQTQMIQECLCAGKPVIVATQMLESMQRNPRPTKAEISDVWNA EECCCCCEECCCCEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VLQGTTATMLSGESASGLYPEKSVSYMAKINHKAEEYLDYDLISNFYDPQNRVEYLAFSV HHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IQMALKDQIHAIVIEDDLAYGYAFAKFRSKVPVFVKVKDLKSSTTLALNFSNFPFLTEAE HHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCEEHHH LMTKLNLLKSENQNNLVFAVIKKDSLTLKNF HHHHHHHHHCCCCCCEEEEEEECCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA