| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294182
Identifier: 197294182
GI number: 197294182
Start: 19340
End: 19909
Strand: Direct
Name: 197294182
Synonym: PAa_0016
Alternate gene names: NA
Gene position: 19340-19909 (Clockwise)
Preceding gene: 197294181
Following gene: 197294183
Centisome position: 2.2
GC content: 13.68
Gene sequence:
>570_bases ATGCATAATATTAATTATTTTTTCAAATCTTTTGTAATTTTAGATATAATTTTTACCATAATTTTAACTACTATTGTTTT GAAAATTATATTTTTAATATTTTCTTTTGTATATACAATTATTAAAAAAATAACATATATAAAGTTTTTTTGTTTTCGTG TAAAAATTTTAAAATTCATTATAAAACAAAATATTGATGCATTAGATATATTAAAAACTAAAATAATTTTTTTTCAAAAA GATTTAAAAGAAAATAATAATTTGCAAAAGAAAATAATTAATCGAATCGATAAAAATCTTTTATATCAAACATTTTATTC ACAAATAGTAAACTTTAATTTAGTAAATTTTAATCTTGATTTGCAAAAAAATCATGAAGAAGGATTAATTAATTCTTTAA ATTTTTTGTTTTGGATAGAAAAACACAACAAACAAATCAATTTTAATAATAATGGTTTAATTATTATGATTGATAAAATT GTTGATAATTTAAAAAAAGAATTATTTTATTTTAATAAAGAAAAAAAGATACTAATGTTAATATTGATAACAAAATTAAA AAAATATTAA
Upstream 100 bases:
>100_bases GAACAGCATATTATTTTTTAATTTGGGATTTAGAATATTTTTTAATCATTTGTACCATAATATAAAATATATAATTTTTT ACATATAGAAAAGAGTATTC
Downstream 100 bases:
>100_bases ATATATTTAAATTTATCTGTATATTGCATAAAATATGTAAATATACATTTGAAAGTTATATCAACCAAGAAGAATTTACA AAATTAAAAATCTTATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MHNINYFFKSFVILDIIFTIILTTIVLKIIFLIFSFVYTIIKKITYIKFFCFRVKILKFIIKQNIDALDILKTKIIFFQK DLKENNNLQKKIINRIDKNLLYQTFYSQIVNFNLVNFNLDLQKNHEEGLINSLNFLFWIEKHNKQINFNNNGLIIMIDKI VDNLKKELFYFNKEKKILMLILITKLKKY
Sequences:
>Translated_189_residues MHNINYFFKSFVILDIIFTIILTTIVLKIIFLIFSFVYTIIKKITYIKFFCFRVKILKFIIKQNIDALDILKTKIIFFQK DLKENNNLQKKIINRIDKNLLYQTFYSQIVNFNLVNFNLDLQKNHEEGLINSLNFLFWIEKHNKQINFNNNGLIIMIDKI VDNLKKELFYFNKEKKILMLILITKLKKY >Mature_189_residues MHNINYFFKSFVILDIIFTIILTTIVLKIIFLIFSFVYTIIKKITYIKFFCFRVKILKFIIKQNIDALDILKTKIIFFQK DLKENNNLQKKIINRIDKNLLYQTFYSQIVNFNLVNFNLDLQKNHEEGLINSLNFLFWIEKHNKQINFNNNGLIIMIDKI VDNLKKELFYFNKEKKILMLILITKLKKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22934; Mature: 22934
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNINYFFKSFVILDIIFTIILTTIVLKIIFLIFSFVYTIIKKITYIKFFCFRVKILKFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKQNIDALDILKTKIIFFQKDLKENNNLQKKIINRIDKNLLYQTFYSQIVNFNLVNFNLD HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE LQKNHEEGLINSLNFLFWIEKHNKQINFNNNGLIIMIDKIVDNLKKELFYFNKEKKILML ECCCCCCHHHHHHHHHEEEEECCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHH ILITKLKKY HHHHHHHCC >Mature Secondary Structure MHNINYFFKSFVILDIIFTIILTTIVLKIIFLIFSFVYTIIKKITYIKFFCFRVKILKFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IKQNIDALDILKTKIIFFQKDLKENNNLQKKIINRIDKNLLYQTFYSQIVNFNLVNFNLD HHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEE LQKNHEEGLINSLNFLFWIEKHNKQINFNNNGLIIMIDKIVDNLKKELFYFNKEKKILML ECCCCCCHHHHHHHHHEEEEECCCEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHH ILITKLKKY HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA