| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294176
Identifier: 197294176
GI number: 197294176
Start: 11861
End: 12040
Strand: Reverse
Name: 197294176
Synonym: PAa_0008
Alternate gene names: NA
Gene position: 12040-11861 (Counterclockwise)
Preceding gene: 197294177
Following gene: NA
Centisome position: 1.37
GC content: 25.0
Gene sequence:
>180_bases TTGTTTAAAAGAAGTTTTATGGAAGAATTAAAATTATTTCAGCATCCCAATCCATTAATTTGTATGGGTGATGATCAAAA TGATTTAGAAATGTTAAAATTAGCAGATATTGCTATTACTATGGGAAACACAAAAATAGAAGAATTAAAAGAAATTTCAA ACCTTATAACTCATCATTAG
Upstream 100 bases:
>100_bases CACAAAAATAGAAGAATTAAAAGAAATTTCAAACCTTATAACTCATCATTAGATGAAGATCGTATATATGTTTTTTTTAA ACAAAGTAATTTAATTTAAT
Downstream 100 bases:
>100_bases ATGAAGACCGTATATATGACGTTCTTAAAACATACTAATTTAATTTGTTTATAAAATAATTAAAGTCAAATTTACCTACC AAAATAAGTAAATTTGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MFKRSFMEELKLFQHPNPLICMGDDQNDLEMLKLADIAITMGNTKIEELKEISNLITHH
Sequences:
>Translated_59_residues MFKRSFMEELKLFQHPNPLICMGDDQNDLEMLKLADIAITMGNTKIEELKEISNLITHH >Mature_59_residues MFKRSFMEELKLFQHPNPLICMGDDQNDLEMLKLADIAITMGNTKIEELKEISNLITHH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6887; Mature: 6887
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 8.5 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 8.5 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRSFMEELKLFQHPNPLICMGDDQNDLEMLKLADIAITMGNTKIEELKEISNLITHH CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MFKRSFMEELKLFQHPNPLICMGDDQNDLEMLKLADIAITMGNTKIEELKEISNLITHH CCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA