| Definition | Clostridium botulinum A3 str. Loch Maree, complete genome. |
|---|---|
| Accession | NC_010520 |
| Length | 3,992,906 |
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Identifier: 170760479
GI number:
Start: 1878212
End: 1879795
Strand: Direct
Name: Not Available
Synonym: CLK_1101
Alternate gene names: NA
Gene position: NA
Preceding gene: 170759184
Following gene: 170759029
Centisome position: NA
GC content: NA
Gene sequence:
>1584_bases ATGAATAGCTTTATAGAACAATTAATACTGAAAAAATCACAAATATTGTCTCTTCTAGTAGAACATGTAGAACTTACTTT AATATCAGTTTTAGTAGCAGTAGTTATTGGAGTTCCCCTTGGTATAATTATTACTAAAAATAAAAAGTTAGCTAAAACAG TAATAGGTTTTGCAAATTTAACTCAAGCTATACCAAGTTTAGCTATTTTAGGGTTTTTAATACCTTTAATAGGCATAGGA TCAGCACCTGCTATAACTATGGTTGTTTTATATTCAATGTTACCAATATTAAAAAATACCTATACAGGAATTACAAATAT AAATCCAGATATGTTAGAAGCAGCTAAAGGTTTAGGTATGACAAACACCCAAACTCTTAAATTAATAAAAATACCTTTAG CAATGCCAATAATAATGGCAGGTATAAGAATAGCATCAGTAACAGCTGTTGGGCTTATGACTATAGCAGCTTTTATTGGT GCAGGTGGACTTGGATACTTAGTATTCTCAGGAATACAAACTGTAGATAATAATCTTATACTATTTGGTGCTATTCCAGC GGCTATATTAGCTTTAGTAATAGATTGGGTAACAGGTAAAATAGAAGATGCTACTATGCCAAATGGTATAAAAAAAGCAG ATGGCACAATGAAAATAAAAAGAAGCTCTTCAAATAAAAGCAGAAAGAGAAATACTATAATAGCGGCAATAGTTGGAGCT TGCTTAGTGCTTCCATTAATAGTTTCAAATCTAATAGGAATGGGACATAAAAAAGTAGTTATTGGTTCTAAAAATTTTAC AGAACAACTGATTTTAGGTAATATATTAGAAGAACTAATTAAAGACAAAACGGATATAGATGTTGAAACAAAGTTAAATT TAGGAGGAACCCAAGTAAGTTTTAATGCACTAAAAGCTGGTGGAATAGATATGTATGTTGAGTATACAGGTACTGCATAT GGAAATATACTAAATATAAAAGAACCTAATAGAGATAAAGATGTTGTTTATAATAGAGTTAAAAAAGACTTTAAAGAAAA ATTTGGAATTGAAGTATTAAATCCTATTGGCTTTAACAATACTTATGCAATGGCAACTACAAAAGAGATTGCACAAAAGT ATAATTTAAAAACAACATCAGATCTAGCAAAGGAATCAAGCAATATGATAGCAGGACCAACAATAGAATTTGCAAATAGA GAAGATGGGCTTATAGGACTTAATAAAGCATATAATGTGAATTTTAAAGGCGTTAAACCAATAGACGGTGGGCTAAGATA TACAGCCTTAGTTAATAATGAAACTCAAATTATAGATGCTTTTACAACAGATGGGTTAATAGAACAGTTTAATTTAGTTC TTTTAGAGGATGACAAGCGCTTTTTTCCAGACTATTATGCAGTTCCGATCGTAAAAGAAGAAACATTAAAAAAATTCCCA GAGCTTAGGGAAGTTTTAGGAAATCTAGATGGAAGAATAACTGACGAAAAAATGAGAAAATTAAACTATGAAGTAGATGT AAACAAAAGAGACCCTAAACAAGTAGCAAAAGAATTTTTGCAAAAAGAAGGGTTAATAGATTAA
Upstream 100 bases:
>100_bases CCTGTAAGGAATAGTGAAGGAAAACTTTTAGGATTGATAACAAGAAGTAGTTTAATATCAGTTTTAAGTAGTCAGTATAT AGATATGGAGGGGATAATTG
Downstream 100 bases:
>100_bases AATATTTAAATATATTTAATTTATAAGAAGAAATTTTAAATAAATAAAATAGAAATATACCTGGGAGAAAAAAACAGAGA ATTTCTATATAAAGTAATAG
Product: glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>527_residues MNSFIEQLILKKSQILSLLVEHVELTLISVLVAVVIGVPLGIIITKNKKLAKTVIGFANLTQAIPSLAILGFLIPLIGIG SAPAITMVVLYSMLPILKNTYTGITNINPDMLEAAKGLGMTNTQTLKLIKIPLAMPIIMAGIRIASVTAVGLMTIAAFIG AGGLGYLVFSGIQTVDNNLILFGAIPAAILALVIDWVTGKIEDATMPNGIKKADGTMKIKRSSSNKSRKRNTIIAAIVGA CLVLPLIVSNLIGMGHKKVVIGSKNFTEQLILGNILEELIKDKTDIDVETKLNLGGTQVSFNALKAGGIDMYVEYTGTAY GNILNIKEPNRDKDVVYNRVKKDFKEKFGIEVLNPIGFNNTYAMATTKEIAQKYNLKTTSDLAKESSNMIAGPTIEFANR EDGLIGLNKAYNVNFKGVKPIDGGLRYTALVNNETQIIDAFTTDGLIEQFNLVLLEDDKRFFPDYYAVPIVKEETLKKFP ELREVLGNLDGRITDEKMRKLNYEVDVNKRDPKQVAKEFLQKEGLID
Sequences:
NA
Specific function: NA
COG id: COG1732
COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA