| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757825
Identifier: 170757825
GI number: 170757825
Start: 3939719
End: 3940723
Strand: Reverse
Name: 170757825
Synonym: CLD_0850
Alternate gene names: NA
Gene position: 3940723-3939719 (Counterclockwise)
Preceding gene: 170757039
Following gene: 170754926
Centisome position: 99.56
GC content: 25.47
Gene sequence:
>1005_bases ATGTATAACAAACAAAATAAAACCAATTCTCTAGTAGAGGCAGGTCTCATAGTTGCATTAATGATAGTACTTATAATGCT TAATTTGTATTTTCCTATATTCACCGTTTTCGGTAGTTTTATATTGCCTATACCTATAGCGGTTTTATACATGAGACAAG ACTATAAAATTACAATATGGGCTATACTTGTAACAGGAGTAATAACCATGCTAATAAATAATCCTATTACAGCATTAACT ACAACCATTTCTTTTGGTATAATGGGATTTTTATTAGGTTATTGTATAAAAAAAGAAAAATCTATATTTATAACAATTGT TATATTAGCAGCTGGTTTCTTATTATCGAATATTATGATTTTTTTCATATATTTTTCATTTATAGATAAGAGGGGAATAA TTGGATATATAAATGAAAATATAAATATTATAAAAGAATCTATGGAATTAACTAAGGAGTTTTATTCCAAGGCGGGTGTG TCTAAGGATAAGCTTCAACAAATAGATCAGGTATTTGGCTCTTTAAATTTAGATTCAATGTTGAAAATGTTACCGGTAGC TTTAATAATAATTGCTTTTTTATCAGCATTTTTGAATTATGCTGTGACTAAAAAGGTTCTCATGAAATTAGGATATAAAA ATGTAAAGTCCTTGCCAAGTATATCTAAAATATATGTTAATGTAAGATTAGTAACTATAGTAGCTATAGGTTTACTTATA GGTGCTGTATTAAAGAGAAAAACTATAGGATTAGGAGACTATTTTTTTATAACAGCTTCATATTTATTAATAATATTACT TTTAATAGACGGTATATCCACCTTTATATATTATATGAGAAATAAATTTAAGATCTCAAAAGGTATTTTAATCTTTATAT TTTTAATGACTTTAGGTCCCTTATATATTATTTATTTTTATTTAGGGTTAGCGGATATAATGCTTGATTTCAGAAAATTA GATCCCTTTAGACAATATAAGAATAATAAAAGTGGGGAATTATAA
Upstream 100 bases:
>100_bases TAAAAGTGGGCATAATTGAAGAAGATGACATAGAAAAGGATGGAAGAAATTTAAGTAAATTATATAATCATCTTAAAGAA AAAGAGTAATGGAGGAACAT
Downstream 100 bases:
>100_bases ATGAGTGATAATAGGTACGATAATTTTATTACAAATAACAAAGTATATATGTTTATTATAGCCATACTAATAGTTATTAT CTTTTCATACAAACATTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MYNKQNKTNSLVEAGLIVALMIVLIMLNLYFPIFTVFGSFILPIPIAVLYMRQDYKITIWAILVTGVITMLINNPITALT TTISFGIMGFLLGYCIKKEKSIFITIVILAAGFLLSNIMIFFIYFSFIDKRGIIGYINENINIIKESMELTKEFYSKAGV SKDKLQQIDQVFGSLNLDSMLKMLPVALIIIAFLSAFLNYAVTKKVLMKLGYKNVKSLPSISKIYVNVRLVTIVAIGLLI GAVLKRKTIGLGDYFFITASYLLIILLLIDGISTFIYYMRNKFKISKGILIFIFLMTLGPLYIIYFYLGLADIMLDFRKL DPFRQYKNNKSGEL
Sequences:
>Translated_334_residues MYNKQNKTNSLVEAGLIVALMIVLIMLNLYFPIFTVFGSFILPIPIAVLYMRQDYKITIWAILVTGVITMLINNPITALT TTISFGIMGFLLGYCIKKEKSIFITIVILAAGFLLSNIMIFFIYFSFIDKRGIIGYINENINIIKESMELTKEFYSKAGV SKDKLQQIDQVFGSLNLDSMLKMLPVALIIIAFLSAFLNYAVTKKVLMKLGYKNVKSLPSISKIYVNVRLVTIVAIGLLI GAVLKRKTIGLGDYFFITASYLLIILLLIDGISTFIYYMRNKFKISKGILIFIFLMTLGPLYIIYFYLGLADIMLDFRKL DPFRQYKNNKSGEL >Mature_334_residues MYNKQNKTNSLVEAGLIVALMIVLIMLNLYFPIFTVFGSFILPIPIAVLYMRQDYKITIWAILVTGVITMLINNPITALT TTISFGIMGFLLGYCIKKEKSIFITIVILAAGFLLSNIMIFFIYFSFIDKRGIIGYINENINIIKESMELTKEFYSKAGV SKDKLQQIDQVFGSLNLDSMLKMLPVALIIIAFLSAFLNYAVTKKVLMKLGYKNVKSLPSISKIYVNVRLVTIVAIGLLI GAVLKRKTIGLGDYFFITASYLLIILLLIDGISTFIYYMRNKFKISKGILIFIFLMTLGPLYIIYFYLGLADIMLDFRKL DPFRQYKNNKSGEL
Specific function: Unknown
COG id: COG4241
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37927; Mature: 37927
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNKQNKTNSLVEAGLIVALMIVLIMLNLYFPIFTVFGSFILPIPIAVLYMRQDYKITIW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AILVTGVITMLINNPITALTTTISFGIMGFLLGYCIKKEKSIFITIVILAAGFLLSNIMI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FFIYFSFIDKRGIIGYINENINIIKESMELTKEFYSKAGVSKDKLQQIDQVFGSLNLDSM HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH LKMLPVALIIIAFLSAFLNYAVTKKVLMKLGYKNVKSLPSISKIYVNVRLVTIVAIGLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GAVLKRKTIGLGDYFFITASYLLIILLLIDGISTFIYYMRNKFKISKGILIFIFLMTLGP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYIIYFYLGLADIMLDFRKLDPFRQYKNNKSGEL HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC >Mature Secondary Structure MYNKQNKTNSLVEAGLIVALMIVLIMLNLYFPIFTVFGSFILPIPIAVLYMRQDYKITIW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AILVTGVITMLINNPITALTTTISFGIMGFLLGYCIKKEKSIFITIVILAAGFLLSNIMI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FFIYFSFIDKRGIIGYINENINIIKESMELTKEFYSKAGVSKDKLQQIDQVFGSLNLDSM HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHH LKMLPVALIIIAFLSAFLNYAVTKKVLMKLGYKNVKSLPSISKIYVNVRLVTIVAIGLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GAVLKRKTIGLGDYFFITASYLLIILLLIDGISTFIYYMRNKFKISKGILIFIFLMTLGP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYIIYFYLGLADIMLDFRKLDPFRQYKNNKSGEL HHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA