| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is wtpB [H]
Identifier: 170757795
GI number: 170757795
Start: 1235607
End: 1236470
Strand: Direct
Name: wtpB [H]
Synonym: CLD_3453
Alternate gene names: 170757795
Gene position: 1235607-1236470 (Clockwise)
Preceding gene: 170756755
Following gene: 170754910
Centisome position: 31.22
GC content: 26.39
Gene sequence:
>864_bases GTGAAAGAAAAGATGAAACCTTATATATTATTATTACCAGTTACAATAATAATAGTTTCTATATTAGGAGTAGGAATAAT AAATTGCCTAAGTCAAAGCTTAGGCTATTTTCCTACAGTGGGCTTGAATGAAATTACACTTAAATACTATAAAGAGATTC TAACTTCTAGGGAATTTGTAGAATCTTTAAAGTTTAGTTTATTTACCTGTATTTTATCTTCTTTAATAGCTGAATTTATT GGTGTTGTTTTAGCTTATATTATATTTACGCATAAGAAGAGGAGTAAAATTTTAGATGTTATATATAAGATACCTATAAT AATACCTCATACTGTTGCAGTTTTACTTATTATAAATATGCTATCACAAAATGGAATATTGGCTAGAATACTATATAATT TAGGATTAATAAGTTCTAGAAATATTTTTCCTAATCTTATAATGGATAAATGGGGAATAGGTATAATAATAACTTATGTA TGGAAGGAGATACCTTTTATTATACTGGTTATCTATGCTGTATTAACTAATATAGATGAAAAAATGTGGTATCTTTCAAG AACACTGGGGGCTAGTAAAACACAAACTTTTTTTTATGTCATATTTCCTATGCTTGTGCCCTCTATTTTATCTTCTTTTA TAATAATCTTTGCTTTTTCTTTTGGAGCTTTTGAGGTACCTTATTTGTTAGGACCAACTACTCCAAAATCACTTCCAGTT AAGGCATATATAGAATATTCTAATCCAGATTTAACCAATAGGCCTTATGCTATGGTAATAAATACTATACTTATAGTTAT ATCGACCTTCTTAATAATTTTGTATAGAAAATCTTTGGATATTTTTAAAAAAGAATCTAAATAA
Upstream 100 bases:
>100_bases CAAAGTGAATTGCTACCACACAGATTACCAGAGTTGCCAGCAGAATTAGTACCAATTATAGAAAAAATATGGCAAGAAAA TATACCAGGAGATAAATAAA
Downstream 100 bases:
>100_bases TAAATAGGAAAGGAAAATATTATAAATGAGAAATAAAAAAATAATTTCTAATATAATAATATATAGCTTCGCATTTTTCT TTCTATTTCCTATAATAATA
Product: ABC transporter, permease protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKEKMKPYILLLPVTIIIVSILGVGIINCLSQSLGYFPTVGLNEITLKYYKEILTSREFVESLKFSLFTCILSSLIAEFI GVVLAYIIFTHKKRSKILDVIYKIPIIIPHTVAVLLIINMLSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYV WKEIPFIILVIYAVLTNIDEKMWYLSRTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFGAFEVPYLLGPTTPKSLPV KAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDIFKKESK
Sequences:
>Translated_287_residues MKEKMKPYILLLPVTIIIVSILGVGIINCLSQSLGYFPTVGLNEITLKYYKEILTSREFVESLKFSLFTCILSSLIAEFI GVVLAYIIFTHKKRSKILDVIYKIPIIIPHTVAVLLIINMLSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYV WKEIPFIILVIYAVLTNIDEKMWYLSRTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFGAFEVPYLLGPTTPKSLPV KAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDIFKKESK >Mature_287_residues MKEKMKPYILLLPVTIIIVSILGVGIINCLSQSLGYFPTVGLNEITLKYYKEILTSREFVESLKFSLFTCILSSLIAEFI GVVLAYIIFTHKKRSKILDVIYKIPIIIPHTVAVLLIINMLSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYV WKEIPFIILVIYAVLTNIDEKMWYLSRTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFGAFEVPYLLGPTTPKSLPV KAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDIFKKESK
Specific function: Part of the ABC transporter complex wtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1176
COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=184, Percent_Identity=24.4565217391304, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787369, Length=245, Percent_Identity=26.530612244898, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32717; Mature: 32717
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKMKPYILLLPVTIIIVSILGVGIINCLSQSLGYFPTVGLNEITLKYYKEILTSREFV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ESLKFSLFTCILSSLIAEFIGVVLAYIIFTHKKRSKILDVIYKIPIIIPHTVAVLLIINM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYVWKEIPFIILVIYAVLTNIDE HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH KMWYLSRTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFGAFEVPYLLGPTTPKSLPV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCE KAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDIFKKESK EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKEKMKPYILLLPVTIIIVSILGVGIINCLSQSLGYFPTVGLNEITLKYYKEILTSREFV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH ESLKFSLFTCILSSLIAEFIGVVLAYIIFTHKKRSKILDVIYKIPIIIPHTVAVLLIINM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LSQNGILARILYNLGLISSRNIFPNLIMDKWGIGIIITYVWKEIPFIILVIYAVLTNIDE HHCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH KMWYLSRTLGASKTQTFFYVIFPMLVPSILSSFIIIFAFSFGAFEVPYLLGPTTPKSLPV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEECCCCCCCCCE KAYIEYSNPDLTNRPYAMVINTILIVISTFLIILYRKSLDIFKKESK EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]