| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757780
Identifier: 170757780
GI number: 170757780
Start: 167311
End: 168291
Strand: Direct
Name: 170757780
Synonym: CLD_0657
Alternate gene names: NA
Gene position: 167311-168291 (Clockwise)
Preceding gene: 170755535
Following gene: 170757023
Centisome position: 4.23
GC content: 29.56
Gene sequence:
>981_bases ATGACAAGAGCTTTAGCTATGATATCAGGTGGCTTAGATAGTACATTAGCTGCTAAACTTATAAAAGATCAAGGTATAGA AGTAATAGGAATATGCTTCAGATCATATTTTTTTAATGAAAAAAATGCAGAGAGAATGACTAAACAGATTGATATACCTT TAGAAGTAGTGGATTTTTCAAAGGAACATTTAGATATGGTTAAAAACCCCAAACATGGGTATGGGAAAAATATGAATCCA TGTATTGATTGTCATGCTATGATGATGAAGTATTCAGGAGAACTTTTAAAAAAATTTAATGCAGACTTCATAATAACAGG AGAGGTTTTAAATCAGAGACCTATGTCGCAAAATAAGGCAGCTTTAAATGTAGTAAAAAAAGAATCAGGATATGAAGAAA AAATATTAAGACCGTTGTGTGCTAAGATTTTACCACCTACAGAAATGGAATTACAAAATCTTGTAGACAGAGAAAAACTT TTAAATATATCTGGTAGAAGTAGAAAGGTTCAAATGGAATTAGCAGAAAAATGGGGTATAAAAGAGTACCCTTCACCAGC TGGGGGTTGTAAACTTACAGAGCCTAATTATGCAAAAAGATTAAAGGATTTACTAAAACATAAAGAAACTCCTGAAGTAA GGGAGCTTGAATTATTAAAATATGGAAGACATTTTAGAATATCAGAGGATTGTAAAATAATATCTACTAGAACTAAAGAA GAAGGGGATATTATTAAGAATTATTTAGATTCAAAAGACTATATGTTTTTAGCTTGTGACTATAATGGTTCCACTGTGAT AATAATAGGGAAACCTAATGAAGATGATATAAAATTAGCAGCTGAAATAACAGGACGATATAGCAAAGGCAAGGATGAAG ATGAGATAAAAGTTAAGTATGGTAAAGTCAATACTGATTTAAATAATATAATAAAAGTAAAGCCAGCTTCTGATGATTAT TTAAAAAAATTTATAATATAA
Upstream 100 bases:
>100_bases ATAATACAAATAAAGAGTGAATAATAGTGTATTCACTCTTTATTTGTATTATAATAATAGTTATTGAAAAGTAAGTAATA TGAAAAGAAGGGTGAGTTTA
Downstream 100 bases:
>100_bases ATATAAGGAAAAGGAATGTAAGTTATGAAAAAGAAAGCACTTATTCATGTTTTAAGTTCCATACCGGATGTAAAAGAAAA AGATGATTCAATAGAAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Thiamine Biosynthesis Protein-Like Protein; tRNA Methyl Transferase-Like Protein; ThiI Family Protein; Arginino Succinate Synthase; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNP CIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKL LNISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRISEDCKIISTRTKE EGDIIKNYLDSKDYMFLACDYNGSTVIIIGKPNEDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNIIKVKPASDDY LKKFII
Sequences:
>Translated_326_residues MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNP CIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKL LNISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRISEDCKIISTRTKE EGDIIKNYLDSKDYMFLACDYNGSTVIIIGKPNEDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNIIKVKPASDDY LKKFII >Mature_325_residues TRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNPC IDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLL NISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRISEDCKIISTRTKEE GDIIKNYLDSKDYMFLACDYNGSTVIIIGKPNEDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNIIKVKPASDDYL KKFII
Specific function: Unknown
COG id: COG0482
COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37212; Mature: 37081
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFS CCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCC KEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCHH ALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNISGRSRKVQMELAEKWGI HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC KEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRISEDCKIISTRTKE CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEECCCCC EGDIIKNYLDSKDYMFLACDYNGSTVIIIGKPNEDDIKLAAEITGRYSKGKDEDEIKVKY CHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCCCEEEEE GKVNTDLNNIIKVKPASDDYLKKFII ECCCCCCCCEEEECCCCHHHHHHHCC >Mature Secondary Structure TRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFS CCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCC KEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKA HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCHH ALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNISGRSRKVQMELAEKWGI HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC KEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRISEDCKIISTRTKE CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEECCCCEEEECCCCC EGDIIKNYLDSKDYMFLACDYNGSTVIIIGKPNEDDIKLAAEITGRYSKGKDEDEIKVKY CHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEHHCCCCCCCCCCCEEEEE GKVNTDLNNIIKVKPASDDYLKKFII ECCCCCCCCEEEECCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA