| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is dapG
Identifier: 170757733
GI number: 170757733
Start: 2527753
End: 2528958
Strand: Reverse
Name: dapG
Synonym: CLD_2231
Alternate gene names: 170757733
Gene position: 2528958-2527753 (Counterclockwise)
Preceding gene: 170756878
Following gene: 170754867
Centisome position: 63.89
GC content: 31.84
Gene sequence:
>1206_bases ATGAAAATCTTAATTCAAAAGTTTGGAGGAACATCTGTATCTACAGCTGAAAGAAGATCTTTAGTAGTAGATAAAATAGT TAAGGCAAAAAAAGCAGGTTATTATCCAGTGGTGGTAGTATCTGCTATGGGTAGAAAAGGACAGCCTTATGCTACAGACA CATTGAGATCTTTGGTTGGAGAAGACTTTTTAGATAAAAATACCTTAGCTGCTGATCTTTTAATGGGTTGCGGTGAATTA ATAAGCACAGTAGTTATGAGCTCAGAACTTTTTAATAAGGGAATAGATGCAGTACCTTTAATGGGAGGACAGGCAGGTAT TATAACAGATAATAATTTTAACAATGCTTCTGTACTTAGAGTAGAAAAAGATAGAATAGTAGATTTACTGAAAAAAGATA AAATTCCTGTAGTGGCAGGTTTTCAAGGGAAAAGTGAAGATGGTTATATAACTACCCTAGGAAGAGGTGGCAGTGATGTT ACTGCCGCACTTTTAGGAGCTGCATTAGAGGCTGAAAGTGTAGAAATATATACGGATGTAGATGGTATAATGACTGCAGA TCCTAGAATAGTAGAGAATGCCTCCTTAATAAAAGAAATAAGTTATAATGAGGTGTTTCAATTTGCAGATCAAGGGGCTA AGGTAATACATCCAAGAGCAGTAGAAATTGCCATGACGGCAAATACAAAACTTGTAATAAAAAACACTATGACAGATTGC AAAGGTACCACTATAAATAATATAGGAATTAAAAATTCAAATAATGTTATAACAGGTATTACCCATATGAGTAATAGAAC GCAAATTATAGTAGATGCAGAAGAAAATAAAGGAAATAAAAACTATACTAACCTATTAAATTCATTGGCAGAAAATTCTA TTAGTATTGACCTTATAAATGTTTTTCCTAAAGAAAAAATATTCACTATAGATGAAAAAGATTTTAATGAGTTTAGTTCT ATAATGGAAGGTTTAAAAATAAAATTTTTCTACTTAAAAGATTGTAGTAAAATAGCCATAATAGGTAGTAGAATGAGAGG GATACCTGGGGTTATGGCTAAAATATTAAAGGCACTTGTAGAAAGAAATATAGAAGTGCTTCAAACAGCAGACTCGCATA CAACTATATGGTGTCTTGTTTCTAAGGAAGATACAGAAAAAGCTATAAAATCATTGCACTGTGAATTTAAGTTAGATTGT ATATAA
Upstream 100 bases:
>100_bases AGTGTCTTGGGACTCTGTAAAAAAAATAGGATCAAGAACTATAATAATTGATGCTGAAAAGAGAGAATTAAAAAAAATCC GCTAGGGAGATGGTAGACAA
Downstream 100 bases:
>100_bases ACAAAATTCTTAGCTTCAGGTGGAATTTTAACTCAAATTTGAGCTAAGAAGTGCTTAGATAGGTAATATCAGACATTATC TCTAACTTTGTAAGTGGGAG
Product: aspartate kinase I
Products: NA
Alternate protein names: Aspartate kinase 1; Aspartokinase I [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTANTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFFYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I
Sequences:
>Translated_401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTANTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFFYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I >Mature_401_residues MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVGEDFLDKNTLAADLLMGCGEL ISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLRVEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDV TAALLGAALEAESVEIYTDVDGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTANTKLVIKNTMTDC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLINVFPKEKIFTIDEKDFNEFSS IMEGLKIKFFYLKDCSKIAIIGSRMRGIPGVMAKILKALVERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDC I
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartokinase family [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=462, Percent_Identity=27.0562770562771, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI1790455, Length=266, Percent_Identity=29.3233082706767, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1790376, Length=177, Percent_Identity=28.8135593220339, Blast_Score=69, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320893, Length=364, Percent_Identity=23.9010989010989, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 43802; Mature: 43802
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHC EDFLDKNTLAADLLMGCGELISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEE VEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDVTAALLGAALEAESVEIYTDV ECHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC DGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTANTKLVIKNTMTDC CCEEECCCCHHHCHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLIN CCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE VFPKEKIFTIDEKDFNEFSSIMEGLKIKFFYLKDCSKIAIIGSRMRGIPGVMAKILKALV ECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHH ERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDCI HCCEEEEEECCCCEEEEEEEECCHHHHHHHHHCCCEEEECC >Mature Secondary Structure MKILIQKFGGTSVSTAERRSLVVDKIVKAKKAGYYPVVVVSAMGRKGQPYATDTLRSLVG CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHC EDFLDKNTLAADLLMGCGELISTVVMSSELFNKGIDAVPLMGGQAGIITDNNFNNASVLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEE VEKDRIVDLLKKDKIPVVAGFQGKSEDGYITTLGRGGSDVTAALLGAALEAESVEIYTDV ECHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECC DGIMTADPRIVENASLIKEISYNEVFQFADQGAKVIHPRAVEIAMTANTKLVIKNTMTDC CCEEECCCCHHHCHHHHHHCCHHHHHHHHHCCCEEECCCEEEEEEECCCEEEEEECCCCC KGTTINNIGIKNSNNVITGITHMSNRTQIIVDAEENKGNKNYTNLLNSLAENSISIDLIN CCCEEECCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE VFPKEKIFTIDEKDFNEFSSIMEGLKIKFFYLKDCSKIAIIGSRMRGIPGVMAKILKALV ECCCCEEEEECCCCHHHHHHHHCCCEEEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHH ERNIEVLQTADSHTTIWCLVSKEDTEKAIKSLHCEFKLDCI HCCEEEEEECCCCEEEEEEEECCHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8098035; 9384377 [H]