| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is panC
Identifier: 170757715
GI number: 170757715
Start: 537256
End: 538101
Strand: Reverse
Name: panC
Synonym: CLD_0319
Alternate gene names: 170757715
Gene position: 538101-537256 (Counterclockwise)
Preceding gene: 170756866
Following gene: 170757702
Centisome position: 13.59
GC content: 27.54
Gene sequence:
>846_bases ATGAATATAGTTAATACAATAAAAGATGTTAAATTAATCATAAAAAAATGGAAAGATGAAAATTTATCTATAGGTTATGT ACCTACTATGGGATATTTGCATGAAGGTCATGCCTCTCTTATAAAAAAAGCTAGAGAAGAAAATGATAAAGTTATAGTTT CAATTTTTGTAAATCCAATTCAATTTGGACCAAAGGAAGACTACTCTACTTACCCTAGAGATTTAGTTAAAGATTCATCA TTATGTGAAAAATTTGGAGTAGATTTAATTTTTAATCCTGAAACCTCAGAAATGTATCCTAATAAAATATATAGCCATAT AAATGTGGACATACTTACAGAAAATTTATGTGGAGAAAAAAGACCTGGCCATTTTCAAGGGGTATGCACAGTTTTAACAA AATTTTTTAATATACTAAACCCTACAAAGGCTTATTTGGGTGAAAAAGACGCTCAGCAATTAGCTGTAGTAAGAAAGATG GTAGAGGATTTAAATTTTCCTATAGAAATAATAGGTTGTCCTATAATTAGAGAAGAAGATGGTTTAGCTAAAAGCTCAAG AAATGCTTATTTAAATAAGCAGGAAAGAAAATCTGCCTTAATATTAAATAAAAGTTTAAAGGAAGCTCTAAATGCACTAG AATCTGGAGAAAAAAATTCAAATAATATAAGAGATATTATAGTAAGTAAGCTAAATAAAGAGCCTCTAGCTAAAATAGAT TATGTAAGTATAGTAGATAGCATCACTTTACAATCTGTGGAAAAAATACAATCTTCAATATTAGTAGCTATAGCAGTTTA TATAGGCAAAACAAGACTTATAGACAATTTTACTTTTAAACTATAA
Upstream 100 bases:
>100_bases ACATGCTTTTAAAATAGATGATGATGTAATAAATAAATTATATTAGTTTTTAAATAACCAGCAGAGGGAGGGTAAAGGCT GATTTTCTCAGCTGAATAAT
Downstream 100 bases:
>100_bases CTACACTTTTAAAATAAAATTTTTAGTGAAATGTATAAACAAAATTCTAAATTTCAAAGGAAGTTTTTACTCCCACTAAA GCTTAGAAATCCTATTTCAA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAREENDKVIVSIFVNPIQFGPKEDYSTYPRDLVKDSS LCEKFGVDLIFNPETSEMYPNKIYSHINVDILTENLCGEKRPGHFQGVCTVLTKFFNILNPTKAYLGEKDAQQLAVVRKM VEDLNFPIEIIGCPIIREEDGLAKSSRNAYLNKQERKSALILNKSLKEALNALESGEKNSNNIRDIIVSKLNKEPLAKID YVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL
Sequences:
>Translated_281_residues MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAREENDKVIVSIFVNPIQFGPKEDYSTYPRDLVKDSS LCEKFGVDLIFNPETSEMYPNKIYSHINVDILTENLCGEKRPGHFQGVCTVLTKFFNILNPTKAYLGEKDAQQLAVVRKM VEDLNFPIEIIGCPIIREEDGLAKSSRNAYLNKQERKSALILNKSLKEALNALESGEKNSNNIRDIIVSKLNKEPLAKID YVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL >Mature_281_residues MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAREENDKVIVSIFVNPIQFGPKEDYSTYPRDLVKDSS LCEKFGVDLIFNPETSEMYPNKIYSHINVDILTENLCGEKRPGHFQGVCTVLTKFFNILNPTKAYLGEKDAQQLAVVRKM VEDLNFPIEIIGCPIIREEDGLAKSSRNAYLNKQERKSALILNKSLKEALNALESGEKNSNNIRDIIVSKLNKEPLAKID YVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=42.756183745583, Blast_Score=233, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6322046, Length=310, Percent_Identity=38.3870967741935, Blast_Score=182, Evalue=4e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 31781; Mature: 31781
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAREENDKVIVSIFVNPI CCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH QFGPKEDYSTYPRDLVKDSSLCEKFGVDLIFNPETSEMYPNKIYSHINVDILTENLCGEK CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCEEEEHHHCCCC RPGHFQGVCTVLTKFFNILNPTKAYLGEKDAQQLAVVRKMVEDLNFPIEIIGCPIIREED CCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCC GLAKSSRNAYLNKQERKSALILNKSLKEALNALESGEKNSNNIRDIIVSKLNKEPLAKID CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHH YVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECC >Mature Secondary Structure MNIVNTIKDVKLIIKKWKDENLSIGYVPTMGYLHEGHASLIKKAREENDKVIVSIFVNPI CCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHH QFGPKEDYSTYPRDLVKDSSLCEKFGVDLIFNPETSEMYPNKIYSHINVDILTENLCGEK CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHCCCEEEEHHHCCCC RPGHFQGVCTVLTKFFNILNPTKAYLGEKDAQQLAVVRKMVEDLNFPIEIIGCPIIREED CCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCEEECCC GLAKSSRNAYLNKQERKSALILNKSLKEALNALESGEKNSNNIRDIIVSKLNKEPLAKID CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHH YVSIVDSITLQSVEKIQSSILVAIAVYIGKTRLIDNFTFKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA