| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757700
Identifier: 170757700
GI number: 170757700
Start: 3449099
End: 3450283
Strand: Reverse
Name: 170757700
Synonym: CLD_1357
Alternate gene names: NA
Gene position: 3450283-3449099 (Counterclockwise)
Preceding gene: 170757511
Following gene: 170755640
Centisome position: 87.17
GC content: 25.32
Gene sequence:
>1185_bases GTGTTAGATATGAAAACAAATCCAGTTACTTTGATATTAGCTGCAGTGTTTTTTTCCCCTATTTTAAAAGGCTTTCTTTC AAAGTTTTCTTCTCCAAATTTAAAATTAGATATAGAAGATATAAATAAAACCATATCTTTTGTGATTTCTTTATTTTTAG GCATATATTATAGTAAAAAAATATTCATAGAACATAATGTAGGCATATATAAAGATATATATGAAAGAATACCTAAAAAT ATAATAAAATATATAGATAATAATTTTTTTATGGTATATGTAGTATTAACACCTTTAATAATATTTATAATTTATAAGAT AATATTTTTAGTACTAGATATTTTAAATTCTATAACAATATATCCTATATTAGATAAATTGGAAGACATTTTAAGAGATA AGGGAAATATATTTAAAAGAATATTCGGAGCCTTATTTAATATACCTAAATCTATATGTTATGTGTTATTAATAGCTTTT GTGCTAAATATATTTTCTATGTTCACTAAAAATGATACTTTAAATAAATATCTTCAATCATCTAAAATTTATAATAATAT ATGTAAACAAGCCATAATACCTGTTACTAACTCTAAAATAGCTAAAAAATTACCTAATATAATAAATAATTCTTTTAAAA TAGTGGTAAAAGAAGAGGCGGGGAAAAACTCATCGGAAAAAAATAATTTTAAGGATAAAAAAACCATTGTATATTATAAT GGGGTAACATTAGAAGAGGGGATAAAATCTAATAAACAAATAAATAATTTTGCAAGGCACTTAGCGGCGGAAGATGCTAC ATCAAAAGGAAAAGCAAAAATAATATATGATTGGATCGGTACTAATATATCTTATGATCATGATAAGGCTGAGAAAGTTC TCAAGGATAATTTTCAGGTAAAATCTGGAGCTATCCCTACATTTAATAGTAAGAGCGGAATTTGTTTTGATTATTCCTGT TTATTTATAGCTATGTGTAGAGCAAATGACATAAAGGTAAGATTAGTTACAGGAGAAGGATTTAATGGTGTAAGTTGGGT AAGTCATGCATGGAATCAAGTATATATACCCGAAGAAGGAAGATGGATTAATGTGGATGCAACTTTTTATAAAGGGGGCA ACTATTTTGATACCAAAAGATTTGATATAGATCATAGAAAATCTCAAATTGCAGGAGAATGGTAA
Upstream 100 bases:
>100_bases ATTAAGTAATTACTTATTGAGAAGGGGATTTAGTTTTGAAGAAGTAAAGAAAAGTATAAATCATGTTTTATATGAAAGAG AATAAAGGAATAGGAGGTTG
Downstream 100 bases:
>100_bases AAATGCTAGTAGCTTTTATATAAAAGTTACTAGCATTTTATATAGATTAATATTTATTTTTATATTATAGTTAAAAATCA TTAAATTAATTAATTTTATA
Product: transglutaminase domain-containing protein
Products: NA
Alternate protein names: Transglutaminase Domain Protein; Transglutaminase-Like Cysteine Protease; Transglutaminase-Like Family Protein; Cysteine Protease; Membrane-Bound Protein; Transglutaminase-Like Protein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MLDMKTNPVTLILAAVFFSPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKN IIKYIDNNFFMVYVVLTPLIIFIIYKIIFLVLDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAF VLNIFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSEKNNFKDKKTIVYYN GVTLEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSC LFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW
Sequences:
>Translated_394_residues MLDMKTNPVTLILAAVFFSPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKN IIKYIDNNFFMVYVVLTPLIIFIIYKIIFLVLDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAF VLNIFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSEKNNFKDKKTIVYYN GVTLEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSC LFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW >Mature_394_residues MLDMKTNPVTLILAAVFFSPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKKIFIEHNVGIYKDIYERIPKN IIKYIDNNFFMVYVVLTPLIIFIIYKIIFLVLDILNSITIYPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAF VLNIFSMFTKNDTLNKYLQSSKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSEKNNFKDKKTIVYYN GVTLEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQVKSGAIPTFNSKSGICFDYSC LFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEGRWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45232; Mature: 45232
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDMKTNPVTLILAAVFFSPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCE IFIEHNVGIYKDIYERIPKNIIKYIDNNFFMVYVVLTPLIIFIIYKIIFLVLDILNSITI EEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLNIFSMFTKNDTLNKYLQS HHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSEKNNFKDKKTIVYYN HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC GVTLEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQV CEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEE KSGAIPTFNSKSGICFDYSCLFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEG CCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCEEEECCCC RWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW CEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLDMKTNPVTLILAAVFFSPILKGFLSKFSSPNLKLDIEDINKTISFVISLFLGIYYSKK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCE IFIEHNVGIYKDIYERIPKNIIKYIDNNFFMVYVVLTPLIIFIIYKIIFLVLDILNSITI EEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCH YPILDKLEDILRDKGNIFKRIFGALFNIPKSICYVLLIAFVLNIFSMFTKNDTLNKYLQS HHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SKIYNNICKQAIIPVTNSKIAKKLPNIINNSFKIVVKEEAGKNSSEKNNFKDKKTIVYYN HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEC GVTLEEGIKSNKQINNFARHLAAEDATSKGKAKIIYDWIGTNISYDHDKAEKVLKDNFQV CEEHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCEE KSGAIPTFNSKSGICFDYSCLFIAMCRANDIKVRLVTGEGFNGVSWVSHAWNQVYIPEEG CCCCCCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCEEEECCCC RWINVDATFYKGGNYFDTKRFDIDHRKSQIAGEW CEEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA