| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757693
Identifier: 170757693
GI number: 170757693
Start: 1074266
End: 1075285
Strand: Direct
Name: 170757693
Synonym: CLD_3598
Alternate gene names: NA
Gene position: 1074266-1075285 (Clockwise)
Preceding gene: 170755241
Following gene: 170756961
Centisome position: 27.14
GC content: 23.24
Gene sequence:
>1020_bases ATGATTGGTTGGGAGATAAAAAAAATAGCAAAATCAAAAATTACTTTAATTGCAATGGCAATCTTTATTCTTTTAATATC TATAATGGCAATAATAAAACCAACTTTGGAGGATGAAATAAAGCATGTAAATGAACAACATGAAACAGTTGTAGATAAAA GATCACCTATTGTAATTGGAAAAGAAAATTTTAATAAAAAAATTGATGGGTTAGTAGAAGTCTCTAAGTCTAAAGGAAAA GACTCTATGGAAAAAAGGATAGCAGAGGATTCTAAAAAGAAAATAGAAAATATAAAAGATAATGAATATAAAGAGGTCAA TTTTTGGAAAGTTTTTAGTTATAGAAGCACTCATCTAGCTGCTAGTTTCTTTATGTTAATAATGATTATGTTAATTGTTA GTAATATTTATATTAATGAAAAGATATCATCTGTAGATAATTTGATTTTATCATCTAAAAATAAATTTAAATGTTTATAT TCAAAAATGTTTTTAGCTATATTAATACCTGTTATATTTTATTCAGCATATTTAGGATTGGAATTTTTAATAAGCATAAT TCAATATGGTAAACCAGTAAATGGAGATCTACAAGCTTTTAGAATAATAGATAATTTTGTTCTTCTAAAGGGTGATCCAA CAATAGTAAATTATGTTTCATCAAAAATTTCTGTAATGTATTTAGTATTAATAAGTATATCTTTGGTTATATTCTTATTT TCATCTACATTAAGTAATTCTTTAGCAGTAATAAGCGGCGGAGCTATATTTATTGTATTGGGTAAAGTATGTATGCTTCT AAAGTTCTTACCTAAAAAGCTATTAATGATATTAGATAAAGTTAATTATATTGATATGCTTAGTTATTTTGATATAAATA TAGGAATGAACTGGGGACAGATATCTATATTTGGCAATAATTTTGATCTTATAAATTTTTCAATAGGAATAGTTGCTTCA ATAATATTACTTAGTACTTTATTAATAACAATAAACTTTAAAAAATTTATAACTAATTAA
Upstream 100 bases:
>100_bases TAAGTTAGTGAAACTATAATAATAATTGTTCCGAGGGAAAAAGATAAAAAATAAAAAAATTATAAAATATAATGAACTTA ATAAATTAGGAGGAAAAAGT
Downstream 100 bases:
>100_bases ATTGTATGGAGGAATGGAAAATGAATAAATTAGAAATAAAAAATTTAAATAAAAGATTTGGAGTAAAAAAGGCTACTAAT GATATAACAATAACTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIGWEIKKIAKSKITLIAMAIFILLISIMAIIKPTLEDEIKHVNEQHETVVDKRSPIVIGKENFNKKIDGLVEVSKSKGK DSMEKRIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHLAASFFMLIMIMLIVSNIYINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIVNYVSSKISVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLMILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IILLSTLLITINFKKFITN
Sequences:
>Translated_339_residues MIGWEIKKIAKSKITLIAMAIFILLISIMAIIKPTLEDEIKHVNEQHETVVDKRSPIVIGKENFNKKIDGLVEVSKSKGK DSMEKRIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHLAASFFMLIMIMLIVSNIYINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIVNYVSSKISVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLMILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IILLSTLLITINFKKFITN >Mature_339_residues MIGWEIKKIAKSKITLIAMAIFILLISIMAIIKPTLEDEIKHVNEQHETVVDKRSPIVIGKENFNKKIDGLVEVSKSKGK DSMEKRIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHLAASFFMLIMIMLIVSNIYINEKISSVDNLILSSKNKFKCLY SKMFLAILIPVIFYSAYLGLEFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIVNYVSSKISVMYLVLISISLVIFLF SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLMILDKVNYIDMLSYFDINIGMNWGQISIFGNNFDLINFSIGIVAS IILLSTLLITINFKKFITN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38436; Mature: 38436
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGWEIKKIAKSKITLIAMAIFILLISIMAIIKPTLEDEIKHVNEQHETVVDKRSPIVIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEE KENFNKKIDGLVEVSKSKGKDSMEKRIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHLA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHH ASFFMLIMIMLIVSNIYINEKISSVDNLILSSKNKFKCLYSKMFLAILIPVIFYSAYLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIVNYVSSKISVMYLVLISISLVIFLF HHHHHHHHCCCCCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLMILDKVNYIDMLSYFDINIGMNWGQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCE ISIFGNNFDLINFSIGIVASIILLSTLLITINFKKFITN EEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIGWEIKKIAKSKITLIAMAIFILLISIMAIIKPTLEDEIKHVNEQHETVVDKRSPIVIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEE KENFNKKIDGLVEVSKSKGKDSMEKRIAEDSKKKIENIKDNEYKEVNFWKVFSYRSTHLA CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHH ASFFMLIMIMLIVSNIYINEKISSVDNLILSSKNKFKCLYSKMFLAILIPVIFYSAYLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EFLISIIQYGKPVNGDLQAFRIIDNFVLLKGDPTIVNYVSSKISVMYLVLISISLVIFLF HHHHHHHHCCCCCCCCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTLSNSLAVISGGAIFIVLGKVCMLLKFLPKKLLMILDKVNYIDMLSYFDINIGMNWGQ HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCCCCE ISIFGNNFDLINFSIGIVASIILLSTLLITINFKKFITN EEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA