| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is pssA
Identifier: 170757655
GI number: 170757655
Start: 239283
End: 239804
Strand: Reverse
Name: pssA
Synonym: CLD_0577
Alternate gene names: 170757655
Gene position: 239804-239283 (Counterclockwise)
Preceding gene: 170755103
Following gene: 170754708
Centisome position: 6.06
GC content: 29.12
Gene sequence:
>522_bases ATGGCAAAGATAGCAAAGAGTGCCGTACCAAATGCTTTTACTTTAGGAAATTTAGGTTGTGGAGTTATGTCTTTAATGAT GACATTTCAACAAAACTATAAATGGGCTGCTTTATTTATACTAATTGCAGGTTTAATGGATAGATATGATGGGAGAGTTG CTAGGCTTTTAAAGGTTGATAGTGCTATTGGTAAGGAATTAGATTCTTTAGCTGATTTAGTTTCTTTTGGTGTAGCACCT TCTATTTTAACCTTTCACATTTATAACTTTAGTTATTTAGGAATACTTGGTTATTTATTAGTACTAATGTTCCCTATAGC TGGAGCTTATAGACTTGCTAGATATAATATTACTGAATTTGATGGTTCTTTTTCTGGTATACCTATAACTTTAGCTGGTA TGTTTATGGCTATATATTGTTTAATTAGCTCAAATAAAATTGGAACTTCAGGCCTAACTATAATTTTAATGATTACATTA TCTTATCTTATGGTTAGTAATGTAAAATTAAAAAAATTTTAA
Upstream 100 bases:
>100_bases TTTTTAATGGTATTTATAGCTTATATATATTTGCAAAATGTTGTATAATATTATATATTTCAAGTAATAGGAATTATATT TTTTTAGGAGTGATAATATA
Downstream 100 bases:
>100_bases AAAATCGTGGTTTTCCACGATTTTTTTTATTATTAATAACTTAAATACATTAAAATTTATGTTTTTAATATTAAATTCCT TTTATGCTTTTTAAATATTC
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAP SILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITL SYLMVSNVKLKKF
Sequences:
>Translated_173_residues MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAP SILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITL SYLMVSNVKLKKF >Mature_172_residues AKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVDSAIGKELDSLADLVSFGVAPS ILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEFDGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLS YLMVSNVKLKKF
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=132, Percent_Identity=38.6363636363636, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 18940; Mature: 18809
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVD CCCCHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH SAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC DGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYLMVSNVKLKKF CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKIAKSAVPNAFTLGNLGCGVMSLMMTFQQNYKWAALFILIAGLMDRYDGRVARLLKVD CCCHHHCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH SAIGKELDSLADLVSFGVAPSILTFHIYNFSYLGILGYLLVLMFPIAGAYRLARYNITEF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHC DGSFSGIPITLAGMFMAIYCLISSNKIGTSGLTIILMITLSYLMVSNVKLKKF CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8002567; 9384377 [H]