Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757643

Identifier: 170757643

GI number: 170757643

Start: 2487615

End: 2488037

Strand: Reverse

Name: 170757643

Synonym: CLD_2274

Alternate gene names: NA

Gene position: 2488037-2487615 (Counterclockwise)

Preceding gene: 170757217

Following gene: 170756059

Centisome position: 62.86

GC content: 32.86

Gene sequence:

>423_bases
ATGAAAATTATTTATTGGAGTCAAACAGGAAATACAGAGAAGATGGCAAACTTGATACTAGAAGGAATAGAATCAGAAGG
TGAAAAAGCTGAATTAGTAGAAGTATCATCAGTATCACTTAATGATGTGAAAAATGAAAAAATACTTATTTTAGGATGTC
CAGCATCTGGAGCAGAAGAATTAGAAGAAAGTGAAATGGAGCCTTTTATTAAATCATTAGAAGGAAACATACAAGGAAAA
AAAGTTGCACTTTTTGGTTCATGGGGATGGGGCAATGGCGAATGGATGACAGAATGGGAAAAGAAAATGGAATCATTTGG
AGCTATACTAATAAGCGAAGGTTTAACAGTGCAAGAATATCCAGAAGGAGAAAATGAAGGCAAATGCATAAGTTTTGGAA
AATTAATAGTAAAATCACAATAA

Upstream 100 bases:

>100_bases
AGGAATACAAGGAATAAGATATTCAATTGAGTCTATGTCTCGACTTAAATCAACTGTAATAAATTTTAGAAGTAGATAAT
AAAATTTAGGAGGAATTCAT

Downstream 100 bases:

>100_bases
ATATCTAAAATTATGTATATCAATTTTATAATAATTAAATGCTTTATACATTTACAGTAGTCAAGAGTGGACGCACTCTT
GATTACTGCTTATTATTATA

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK
KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ

Sequences:

>Translated_140_residues
MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK
KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ
>Mature_140_residues
MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEELEESEMEPFIKSLEGNIQGK
KVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEYPEGENEGKCISFGKLIVKSQ

Specific function: Low-potential electron donor to a number of redox enzymes [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010087
- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 15495; Mature: 15495

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEE
CEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHH
LEESEMEPFIKSLEGNIQGKKVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEY
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEC
PEGENEGKCISFGKLIVKSQ
CCCCCCCCEEEECEEEEECC
>Mature Secondary Structure
MKIIYWSQTGNTEKMANLILEGIESEGEKAELVEVSSVSLNDVKNEKILILGCPASGAEE
CEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCHHH
LEESEMEPFIKSLEGNIQGKKVALFGSWGWGNGEWMTEWEKKMESFGAILISEGLTVQEY
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCEEEEC
PEGENEGKCISFGKLIVKSQ
CCCCCCCCEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 4843142; 4843141; 9063874 [H]