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The map label for this gene is yhcC [C]

Identifier: 170757628

GI number: 170757628

Start: 2575273

End: 2576364

Strand: Reverse

Name: yhcC [C]

Synonym: CLD_2187

Alternate gene names: 170757628

Gene position: 2576364-2575273 (Counterclockwise)

Preceding gene: 170754285

Following gene: 170756367

Centisome position: 65.09

GC content: 29.49

Gene sequence:

>1092_bases
ATGAGTAAAAGTCATTATATAATACCAATATTCGTTGCTCAGGAAGGATGTCCACATAATTGTGTTTTTTGTAATCAATA
TAAAATAACCGGGGAAAAGGATGAAATGATAGACGAAAATTATGTGAGAGAAACCATAGAAGCTTATATAAAGACTATAG
ATAGAGAAAATTCAACTTTAGAGGTTTCTTTTTTTGGAGGTACTTTTACAGGTATACCTATAGAAAGACAAAAAAGTCTT
TTAAAAGTAGCAAAGGAATATAAGGATAAGGGCCAAATAGATTATATACATATGTCCACAAGACCAGATTATATAGACAG
AGAAATTTTAGATAATCTTAAAGAATACTCTGCGGATATAATTGAATTAGGAGTTCAATCTTTAGATGATGAAGTTCTTT
TAAAATCAGGAAGAGGACATTCTGTAGAAGAGGTACATAGAGCTTCAAAGCTTATAAGGGAATACGGATTCACTTTGGGA
CATCAAATAATGTTAGGACTTCCGGGAGATACTTTTAAAAAGGATATAGAAACGGTAGCAAAATCTTTAGAGATGGAACC
AGACATAGCAAGAATATACCCAGCCTTAGTAATAAAGGACACTCCTATGGAAGATATGTTAAAAAAGGGAACCTATAAGC
CTTATACTTTAGATGAAGCTATAGATATAACTATGCTATTATATTCCATGTATGAAGAACAAGACGTAAAGGTAATAAGA
ATAGGACTTCAACCTACAGAAGAAATAAATGAAAATAAGGATGTGCTAGGAGGTCCTTTCCATCCAGCTTTTAGAGAATT
AGTGGAGGGAAAAATAATTAATGAGGCTATTTTCTCTCATGTGGAAGATAGTTCAGAAGAAAATTTAGAAATTTATATAA
ATAATAAAGATATATCTAAATTGTATTGTAATAAAAAACAATTTTTTAATGAATCTATAAATAAAAAGAATGTGAAAAGA
TTTAAAGTTATACAAGATGAAACATTAGGTAGAGGGAATATAATTATTAAAAAGGGTGAAAACAAAAAACATATATTTGT
AAAAGAGTATATGACAAAGCTTTCAGAGGAAGGAAAAAACTTATTTATGTAG

Upstream 100 bases:

>100_bases
ACCATAGATAATGAGGTAAGAGGAACTGGAATAGGCTATAGTAAAAAAGAAGCAGAACAAAACGCAGCAAGAGAAGCATT
AAAGAATTTAGGTGATAGCC

Downstream 100 bases:

>100_bases
AATAATATAATTATCAAGTTAATATAAAATTTAGTATCCCCACTGTTTCATATTCGGTGGGGATATATATTTTAGTTTAC
TAATTGATATTTTTTTTTAT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSKSHYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNESINKKNVKR
FKVIQDETLGRGNIIIKKGENKKHIFVKEYMTKLSEEGKNLFM

Sequences:

>Translated_363_residues
MSKSHYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNESINKKNVKR
FKVIQDETLGRGNIIIKKGENKKHIFVKEYMTKLSEEGKNLFM
>Mature_362_residues
SKSHYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIERQKSLL
KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGH
QIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI
GLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNESINKKNVKRF
KVIQDETLGRGNIIIKKGENKKHIFVKEYMTKLSEEGKNLFM

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=269, Percent_Identity=24.1635687732342, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI2367204, Length=196, Percent_Identity=23.469387755102, Blast_Score=70, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI133955098, Length=269, Percent_Identity=23.0483271375465, Blast_Score=75, Evalue=6e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=138, Percent_Identity=31.1594202898551, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI19920684, Length=269, Percent_Identity=24.5353159851301, Blast_Score=78, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41938; Mature: 41806

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSHYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCCCEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCCEEEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNESINKKNVKRFKVIQDETLGRGNIIIKKGENKKHIFVKEYMTKLSEEGKN
HHHCHHHHHHHHCCCCCHHHHEEEHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCC
LFM
CCC
>Mature Secondary Structure 
SKSHYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCCEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIERQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCCEEEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNESINKKNVKRFKVIQDETLGRGNIIIKKGENKKHIFVKEYMTKLSEEGKN
HHHCHHHHHHHHCCCCCHHHHEEEHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHCCCC
LFM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]