| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757621
Identifier: 170757621
GI number: 170757621
Start: 671175
End: 671684
Strand: Direct
Name: 170757621
Synonym: CLD_0201
Alternate gene names: NA
Gene position: 671175-671684 (Clockwise)
Preceding gene: 170756579
Following gene: 170754510
Centisome position: 16.96
GC content: 22.55
Gene sequence:
>510_bases ATGGATGCAAAATTATACATTAATAAATTAGAAAATTCATATAGATCCCATTTTAAAATAAAGAAGGATATTTATTTTTT GGAAAACCATTTAGATATGATAGCTCATTGTAAATTAGTTAATGTTAGAACAATGATTACAGAAAAAGATATTATTGATA GCTTTGAAACAAATGAATTTTGTTTTGTAAAACATTTAGATAACATTTCAAAAAAAACACTAGATAAACATATAGATATG CTTATAGAAGCAGAAAAATTATGTGTAACACCTCATAAAGATCATAAAAGTTCCTATTTAACTGGCATATTAATAAGTGA AAATTCCATTGATGATAATATAAAACAATATGTTAAAAAGTTTAAATTTGCAAAGGCTTATAAATTTTATTGGTTTGGAT GGTGCGATATAAGATTAATTTTGATAGATTTAAAAAATAATGAAGTTACAACTAACAAAGCCGGTAAGTTTGTTAAAAAG GTGTATCAAAAACACTTTAATAAAAATTAG
Upstream 100 bases:
>100_bases GAAAAACATATAGGAGAATTTTAACATAAACAAGGATATATGAAGTTTGATTAATATTTATCAAAGTGGTATGCTTTATT TAAAATAGTGGAGGGAAATT
Downstream 100 bases:
>100_bases GAGGGGTTTTTATGAACTCAGTAGTATTACTCTTAAGTGGTATTATTTTATTTTTGATTGCTTATCTAACTTATGGTAGA TGGCTTGCAAAACATTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTMITEKDIIDSFETNEFCFVKHLDNISKKTLDKHIDM LIEAEKLCVTPHKDHKSSYLTGILISENSIDDNIKQYVKKFKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKK VYQKHFNKN
Sequences:
>Translated_169_residues MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTMITEKDIIDSFETNEFCFVKHLDNISKKTLDKHIDM LIEAEKLCVTPHKDHKSSYLTGILISENSIDDNIKQYVKKFKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKK VYQKHFNKN >Mature_169_residues MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTMITEKDIIDSFETNEFCFVKHLDNISKKTLDKHIDM LIEAEKLCVTPHKDHKSSYLTGILISENSIDDNIKQYVKKFKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKK VYQKHFNKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20178; Mature: 20178
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTMITEKDIIDSFETNEF CCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE CFVKHLDNISKKTLDKHIDMLIEAEKLCVTPHKDHKSSYLTGILISENSIDDNIKQYVKK EEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHH FKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKKVYQKHFNKN HHHHHHHEEEEEEEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDAKLYINKLENSYRSHFKIKKDIYFLENHLDMIAHCKLVNVRTMITEKDIIDSFETNEF CCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE CFVKHLDNISKKTLDKHIDMLIEAEKLCVTPHKDHKSSYLTGILISENSIDDNIKQYVKK EEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHH FKFAKAYKFYWFGWCDIRLILIDLKNNEVTTNKAGKFVKKVYQKHFNKN HHHHHHHEEEEEEEEEEEEEEEEECCCEECCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA