| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757598
Identifier: 170757598
GI number: 170757598
Start: 659674
End: 660099
Strand: Direct
Name: 170757598
Synonym: CLD_0213
Alternate gene names: NA
Gene position: 659674-660099 (Clockwise)
Preceding gene: 170754744
Following gene: 170755565
Centisome position: 16.67
GC content: 27.23
Gene sequence:
>426_bases TTGGAAATCAAAAGAGTAGGAACCAATTCACCGATACAAACAGAAAGTAAAAGAACAATAGAAAATAAAAAGGGATTTTC TCAGAATTTTAATTTTGCCCGTCAGCAAAAGTCGGAGCAAGAATTAAAAAAAATGTTGGACGATATAAACAAAAAAGGAA ATAGGCTAGCTATAACTAAATGTTATGCTGATGTTAAAGCATATAAAAGAATGATAAAAGAATATTTAAAATCAGTTTTA GAATATATGTATTCCGTAAAAAAGGATATAAGTTTTTGGCAAACTCAATACTTTATTACAGTAGAGACAGTAGATGAAAA ACTTCAGGAATTAACAGAAATGTTATTAAGCGCGGAAAAAGAAAATTTAGATATAGCTAAAACTATAGATGATATAACAG GACTTGTTGTAGATATATATAAATAA
Upstream 100 bases:
>100_bases AATTGTTTTACAAATAAAACATATTATATTTATCTATATTTTTAAAAGAAATTTAGCTATAATATATATATGATAAAAAT ATTTAATGGAGTGATTTTAT
Downstream 100 bases:
>100_bases TTTAATTATTATTTATCATTTTCTAAGTAGAAAGTGTTTTATTTAATAAATAGACATAAAAATTATTAAATTATTGGATT TAATAATTTTTATGTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK
Sequences:
>Translated_141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK >Mature_141_residues MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITKCYADVKAYKRMIKEYLKSVL EYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEKENLDIAKTIDDITGLVVDIYK
Specific function: Unknown
COG id: COG1728
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16579; Mature: 16579
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHH CYADVKAYKRMIKEYLKSVLEYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENLDIAKTIDDITGLVVDIYK CCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIKRVGTNSPIQTESKRTIENKKGFSQNFNFARQQKSEQELKKMLDDINKKGNRLAITK CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHH CYADVKAYKRMIKEYLKSVLEYMYSVKKDISFWQTQYFITVETVDEKLQELTEMLLSAEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ENLDIAKTIDDITGLVVDIYK CCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA