| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757592
Identifier: 170757592
GI number: 170757592
Start: 2704584
End: 2705336
Strand: Reverse
Name: 170757592
Synonym: CLD_2038
Alternate gene names: NA
Gene position: 2705336-2704584 (Counterclockwise)
Preceding gene: 170754906
Following gene: 170756520
Centisome position: 68.35
GC content: 26.56
Gene sequence:
>753_bases ATGAAGTTAAAAAATGAAAGTGAGGAAGTTAATATGAATAATTTAGAAAATAGTATAAAGGATTGTATTACAAAGGAGAT TGAAAAAGGAATTATAGAAAAAGTAATTGCAGAACAATTAGAAAAGTGCATTGAAAAATCAATAAGTGATATGTTTGGCT GGAACGGAGAAATAAAGAAAGTAATAGAGAATAAGGTTAAATCAGTAATGATACCTTACTTAGAAGATTATGATTACTCA GAATATATAACAAAGTTAGATAGTGTTTTAATTGATGTTTTAAAAAGTAGTGCTTTAGATAATAAAAAAATCCTAGAAAA CTTTAAAGAATTAATGACCAGTGAAGATATTAAAGAAGCAATTAAATTAAGTGATATATTTAAACAATGGACAGAATATT GTAAGGAAACTATTGATAAAGACAATATAGATATGGATTATGAGGGAGGTTATATAACTACAAGATTTGAAGTAGAGGAA GTTAGTAATAGCTGGAGCAGTTATAAAACTTATATGGTTACATTTGAGTGTGAAGAAGATGAAGAGTTAAAGTTTGAATT TAGTATACAGGCATGGAAACCAACAGCAGATAGTAAATATACCAGCAATTATAAAAACAGTTGTGATTTAAGAAGCTTAA GGTATTTAAATGACTTTGAAATACTAATGATGAGAATAAGTGAAGGTTATGAAAATATAATCTTGGATAGCGAAGGAGAT AGCGAAGATACATTTATAGAATATGAAGAATAA
Upstream 100 bases:
>100_bases GCATTTAAAAAATTAGAAAAAGCATGTAGAAGACTAGTAAATTTTGTACGTGAAATGCAAAATAATTAAGTTAGATTAGT ACGGAATATGAAGTAAAAAT
Downstream 100 bases:
>100_bases TACACAATTTGAAATTATTGTGAAGGAGTGAGAGTTTAAATTGAAAAAAAGTGAGATAACAAATAGTAATCTTAAAAAAG CGATTTTTGTATTACTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKKVIENKVKSVMIPYLEDYDYS EYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEAIKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEE VSNSWSSYKTYMVTFECEEDEELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGD SEDTFIEYEE
Sequences:
>Translated_250_residues MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKKVIENKVKSVMIPYLEDYDYS EYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEAIKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEE VSNSWSSYKTYMVTFECEEDEELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGD SEDTFIEYEE >Mature_250_residues MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKKVIENKVKSVMIPYLEDYDYS EYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEAIKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEE VSNSWSSYKTYMVTFECEEDEELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGD SEDTFIEYEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29480; Mature: 29480
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VIENKVKSVMIPYLEDYDYSEYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEEVSNSWSSYKTYMVTFECEED HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHCCHHCCEEEEEEEECCCC EELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGD CCEEEEEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC SEDTFIEYEE CCCCEEEECC >Mature Secondary Structure MKLKNESEEVNMNNLENSIKDCITKEIEKGIIEKVIAEQLEKCIEKSISDMFGWNGEIKK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VIENKVKSVMIPYLEDYDYSEYITKLDSVLIDVLKSSALDNKKILENFKELMTSEDIKEA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IKLSDIFKQWTEYCKETIDKDNIDMDYEGGYITTRFEVEEVSNSWSSYKTYMVTFECEED HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHCCHHCCEEEEEEEECCCC EELKFEFSIQAWKPTADSKYTSNYKNSCDLRSLRYLNDFEILMMRISEGYENIILDSEGD CCEEEEEEEEEECCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC SEDTFIEYEE CCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA