| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757569
Identifier: 170757569
GI number: 170757569
Start: 2345414
End: 2346163
Strand: Reverse
Name: 170757569
Synonym: CLD_2419
Alternate gene names: NA
Gene position: 2346163-2345414 (Counterclockwise)
Preceding gene: 170757220
Following gene: 170757346
Centisome position: 59.27
GC content: 31.87
Gene sequence:
>750_bases ATGAATGAAGTAACAACGTTTGAAGGTCAAGAAGTAAAAGTAAAAACAGATAAAGGAGTAACGCTTATTAATTTAGCACA TACAGCTAAATGTTGCGGTTTAATTAGAGAAGATAGAGGTTACTCAAAAGTAAGATGGATTGATATTAAAAATAAACTCA AACTTATTGGTAAAAATTGTGTGGACGAAGGTTCGTCCAAAGAAATTCAATATATCCTAGATGAAATAGAAAATACCGAT GATAGAAACACAATTTACATGAGTGGTTGGTTATCAAAGCGCCTAGCACTCGAATGTCATTCTGAAAAAGCAATGAGATA TAAGAACTTCTTAGTTACTTTAGATGAAACAAGGGAGCAAGGACAATTACAATCAGTAAGTCAAGAAACTGTTTTACAGT TAGCACAAGGTATGCAAATGATAGGTCAAGTAGTACAAGGTATGCAAACTGCTATGACTAATATAGAAACTTATGTAAAA GACAGTATTCAATCAAAGGATTTACAAATAGAAAAGACAATGAATTTAATAGGTTTCAGATCGATTAATACCAAAAGACT TTCAGATAAGCTTAAAGAGCAATTAAGTGAGCATTTGGGAATAGCGGTTAATGCAAGTAGCAATGTTTATAGGAGAGCTA AAGGTAAAATCTTTAAAGAGTTCAAGGTAATTAAGTGGGAAGACATACCAGTTAGTAAGTATAATACAGTGCATGCTTTC ATTGAAGAAGTCGTATGCAAAAATATATAG
Upstream 100 bases:
>100_bases GAAACAAATTATAAGCAATCAAAAGAATTTACTGAAATGGTCTTAGATTATGTGAAAAAGAATTTTATTAAAGGTAAATA TTAAGGAAGGAGGACAAGCA
Downstream 100 bases:
>100_bases TACAAAAGGAGGTTTATACATGGACAATAAACTATTAACTCAAAAAGATTTATCTGAAAGATGGCAAGTAAGCGTAAAAG CAATAGAAAGTTATAGACAA
Product: putative antirepressor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNCVDEGSSKEIQYILDEIENTD DRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQGQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVK DSIQSKDLQIEKTMNLIGFRSINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAF IEEVVCKNI
Sequences:
>Translated_249_residues MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNCVDEGSSKEIQYILDEIENTD DRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQGQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVK DSIQSKDLQIEKTMNLIGFRSINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAF IEEVVCKNI >Mature_249_residues MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNCVDEGSSKEIQYILDEIENTD DRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQGQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVK DSIQSKDLQIEKTMNLIGFRSINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAF IEEVVCKNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28519; Mature: 28519
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNC CCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH VDEGSSKEIQYILDEIENTDDRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQ CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC GQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVKDSIQSKDLQIEKTMNLIGFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAF CCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH IEEVVCKNI HHHHHHCCC >Mature Secondary Structure MNEVTTFEGQEVKVKTDKGVTLINLAHTAKCCGLIREDRGYSKVRWIDIKNKLKLIGKNC CCCCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH VDEGSSKEIQYILDEIENTDDRNTIYMSGWLSKRLALECHSEKAMRYKNFLVTLDETREQ CCCCCCHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC GQLQSVSQETVLQLAQGMQMIGQVVQGMQTAMTNIETYVKDSIQSKDLQIEKTMNLIGFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC SINTKRLSDKLKEQLSEHLGIAVNASSNVYRRAKGKIFKEFKVIKWEDIPVSKYNTVHAF CCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHH IEEVVCKNI HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA