| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757528
Identifier: 170757528
GI number: 170757528
Start: 3948423
End: 3948932
Strand: Reverse
Name: 170757528
Synonym: CLD_0837
Alternate gene names: NA
Gene position: 3948932-3948423 (Counterclockwise)
Preceding gene: 170756741
Following gene: 170756720
Centisome position: 99.77
GC content: 23.33
Gene sequence:
>510_bases ATGACAAATATAATAGAATTTATAAATGTAAATTCTGCGTTTATAATTATTGGATTAACAGCAATAATGATTTTATTATT TATAATTCTTATAATTACTATGATTTCTTTAAAAAAATTAAAGGAAAAATATAAAAAGTTTATGAGGGGTAGTAATAATA AAAATATTGAAGAATTAATAAATAATTATTTAGATAAGGTAGATAAGGCAAAAGAGGAAACTGAATATGTAAAAGAAATA TATAGTACTATAGATAAGAGAGTTAAAGCATGTATACAAAAGGTGGCTATAGTTAGATATAGAGCCTTTGATGATGTAGG AAGTGATTTAAGCTATTCAATAGCATTTTTAGATAATGATAATAGTGGAGTTATACTAACAAGCATATTTGGACGGAATG AAAGTACTACTTATGCTAAACCTATAGATAAAGGTATATCAAGATATGATTTGTCAGATGAAGAAAAGCAAGTATTAGAA AACTGTATAAATAATGTTAATGAAAATTAG
Upstream 100 bases:
>100_bases ATAGAAATAGAATATTATTCAGAAGATGATTTACAAAGAATATTAGATATACTAAAATTATAAAATGTTTCACGTGAAAC ATCGACGGAGGAGATAAACT
Downstream 100 bases:
>100_bases AATAAAACCTCCCTTTATGAAAAATAATATTTCATAAAGGGAGGTTTTTATAATGAATATTTTTGTATCAGATACATTAC AAAATTTTAAAAACGGACTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTNIIEFINVNSAFIIIGLTAIMILLFIILIITMISLKKLKEKYKKFMRGSNNKNIEELINNYLDKVDKAKEETEYVKEI YSTIDKRVKACIQKVAIVRYRAFDDVGSDLSYSIAFLDNDNSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVLE NCINNVNEN
Sequences:
>Translated_169_residues MTNIIEFINVNSAFIIIGLTAIMILLFIILIITMISLKKLKEKYKKFMRGSNNKNIEELINNYLDKVDKAKEETEYVKEI YSTIDKRVKACIQKVAIVRYRAFDDVGSDLSYSIAFLDNDNSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVLE NCINNVNEN >Mature_168_residues TNIIEFINVNSAFIIIGLTAIMILLFIILIITMISLKKLKEKYKKFMRGSNNKNIEELINNYLDKVDKAKEETEYVKEIY STIDKRVKACIQKVAIVRYRAFDDVGSDLSYSIAFLDNDNSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVLEN CINNVNEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19381; Mature: 19249
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIIEFINVNSAFIIIGLTAIMILLFIILIITMISLKKLKEKYKKFMRGSNNKNIEELI CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NNYLDKVDKAKEETEYVKEIYSTIDKRVKACIQKVAIVRYRAFDDVGSDLSYSIAFLDND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC NSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVLENCINNVNEN CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TNIIEFINVNSAFIIIGLTAIMILLFIILIITMISLKKLKEKYKKFMRGSNNKNIEELI CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NNYLDKVDKAKEETEYVKEIYSTIDKRVKACIQKVAIVRYRAFDDVGSDLSYSIAFLDND HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC NSGVILTSIFGRNESTTYAKPIDKGISRYDLSDEEKQVLENCINNVNEN CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA