| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is maf
Identifier: 170757523
GI number: 170757523
Start: 3255895
End: 3256479
Strand: Reverse
Name: maf
Synonym: CLD_1540
Alternate gene names: 170757523
Gene position: 3256479-3255895 (Counterclockwise)
Preceding gene: 170754648
Following gene: 170755607
Centisome position: 82.27
GC content: 29.57
Gene sequence:
>585_bases GTGAAAAATATTATATTAGCTTCTGCATCTGAAAGACGACAAGAGCTTTTAAAAAGAATATTGGAAGATTTTCAGATTAT AGTAAGTGATTTTGATGAAAGTAGCATACCTTTTAAAGATAACATATCGTCTTACGTAATGAATTTAGCAGAAGGGAAGG CTAGATCTGTTAGTAAAAAAATAATGGATCAGGATAACAATCTAGTAATAGGGTGCGATACACTAGTAGCTTTTAACAAT AAAATATTAGGTAAACCTAAAGATAAAAAAGATGCCTTTGAAATGTTGCAGGCTTTAAGTGGTAATGAGCATGAAGTTTA TTCTGGATTAGCCATATTAGATATTAAATCTAATAAAATAATAAAGGATTTTGTTTGTACTAAAGTTAAATTTTCAAAAC TAACTTCATTGCAAATAGAAAAATATGTAAATACGGGGGATCCTATGGATAAAGCAGGTGCATATGGTATTCAAGGAAAG GCAGGAGTTTTTGTTGAAAACATCAATGGATGCTATTATAATGTTGTAGGGCTACCTTTAAATAAATTAAATTCTATGTT AATGGAGATGGGGGTAAATCTTTAA
Upstream 100 bases:
>100_bases AAATTTAGCTATAGGTTTAAATTTTGATATTAATATTATGACTATAATGGGTATAGTATTGGCAATAATATTATACAGGA AATAATAGGAAGTGATATCA
Downstream 100 bases:
>100_bases AAGGAGTTGTATAAATGGACAATAACTTTAAAATAAAGGATTTACCTAAAAATGAAAGACCGCAGGAAAGACTTATAAGA TATGGAGCAGAGGTTCTTTC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKNIILASASERRQELLKRILEDFQIIVSDFDESSIPFKDNISSYVMNLAEGKARSVSKKIMDQDNNLVIGCDTLVAFNN KILGKPKDKKDAFEMLQALSGNEHEVYSGLAILDIKSNKIIKDFVCTKVKFSKLTSLQIEKYVNTGDPMDKAGAYGIQGK AGVFVENINGCYYNVVGLPLNKLNSMLMEMGVNL
Sequences:
>Translated_194_residues MKNIILASASERRQELLKRILEDFQIIVSDFDESSIPFKDNISSYVMNLAEGKARSVSKKIMDQDNNLVIGCDTLVAFNN KILGKPKDKKDAFEMLQALSGNEHEVYSGLAILDIKSNKIIKDFVCTKVKFSKLTSLQIEKYVNTGDPMDKAGAYGIQGK AGVFVENINGCYYNVVGLPLNKLNSMLMEMGVNL >Mature_194_residues MKNIILASASERRQELLKRILEDFQIIVSDFDESSIPFKDNISSYVMNLAEGKARSVSKKIMDQDNNLVIGCDTLVAFNN KILGKPKDKKDAFEMLQALSGNEHEVYSGLAILDIKSNKIIKDFVCTKVKFSKLTSLQIEKYVNTGDPMDKAGAYGIQGK AGVFVENINGCYYNVVGLPLNKLNSMLMEMGVNL
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=204, Percent_Identity=39.7058823529412, Blast_Score=144, Evalue=5e-35, Organism=Homo sapiens, GI291045183, Length=201, Percent_Identity=37.3134328358209, Blast_Score=126, Evalue=9e-30, Organism=Homo sapiens, GI291045181, Length=153, Percent_Identity=41.8300653594771, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI310133124, Length=130, Percent_Identity=44.6153846153846, Blast_Score=118, Evalue=3e-27, Organism=Escherichia coli, GI1789646, Length=188, Percent_Identity=43.0851063829787, Blast_Score=143, Evalue=6e-36, Organism=Escherichia coli, GI87081830, Length=195, Percent_Identity=31.2820512820513, Blast_Score=88, Evalue=3e-19, Organism=Caenorhabditis elegans, GI193202443, Length=188, Percent_Identity=37.7659574468085, Blast_Score=129, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6324685, Length=201, Percent_Identity=32.8358208955224, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI78706856, Length=186, Percent_Identity=41.9354838709677, Blast_Score=133, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1540_CLOBK (B1IM03)
Other databases:
- EMBL: CP000939 - RefSeq: YP_001782637.1 - ProteinModelPortal: B1IM03 - GeneID: 6150021 - GenomeReviews: CP000939_GR - KEGG: cbb:CLD_1540 - HOGENOM: HBG414045 - OMA: RNHRVYT - ProtClustDB: PRK00078 - BioCyc: CBOT498213:CLD_1540-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 21582; Mature: 21582
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIILASASERRQELLKRILEDFQIIVSDFDESSIPFKDNISSYVMNLAEGKARSVSKK CCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH IMDQDNNLVIGCDTLVAFNNKILGKPKDKKDAFEMLQALSGNEHEVYSGLAILDIKSNKI HHCCCCCEEEEEHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCH IKDFVCTKVKFSKLTSLQIEKYVNTGDPMDKAGAYGIQGKAGVFVENINGCYYNVVGLPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCH NKLNSMLMEMGVNL HHHHHHHHHHCCCC >Mature Secondary Structure MKNIILASASERRQELLKRILEDFQIIVSDFDESSIPFKDNISSYVMNLAEGKARSVSKK CCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHH IMDQDNNLVIGCDTLVAFNNKILGKPKDKKDAFEMLQALSGNEHEVYSGLAILDIKSNKI HHCCCCCEEEEEHHEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCEEEEEECCCCH IKDFVCTKVKFSKLTSLQIEKYVNTGDPMDKAGAYGIQGKAGVFVENINGCYYNVVGLPL HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCEEEEEECCCH NKLNSMLMEMGVNL HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA