| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is recX
Identifier: 170757511
GI number: 170757511
Start: 3450299
End: 3451234
Strand: Reverse
Name: recX
Synonym: CLD_1356
Alternate gene names: 170757511
Gene position: 3451234-3450299 (Counterclockwise)
Preceding gene: 170756600
Following gene: 170757700
Centisome position: 87.19
GC content: 20.51
Gene sequence:
>936_bases ATGCCAAATATTATTACTAAAATAGAAGTTCAAAAGAGGAATAAAGATAGGGTAAATGTTTATATAGATGAAGAATTTAA TTTTGCTTGCAGCTCAGAATTAATATATTATCATAATCTTAAAAAAGGTAAAGTTATAGATAAGAATAGTCTTAATGATA TAATTAAAGAGGATAACTATATAAAAGCAAAGGGTTATGCATTAAAATATATAGAAAAATCTTTAAAAACAGAAAGTCAG GTTAAAGAAAAGCTATATTTAAAAGAATATGATGAGGATACTGTAAATAAGGTTATTAGATTTTTAAAGGATTATGATTT TATAGATGATGATAAATATTGTGATATGTATATAAGAGAAAAGTTAAATATCTATGGAAGAAATAAAATAAAATATACTC TTTTAAATAAAGGAGTAAAGGAAAATATAGTAATTGAGAAGATAAATAATATAAATGAAGAAAAAGAAAAAAAAGTAGCC TATAAATTAGCAGAGAAAAAATATAAAATTATGATATTAAGGGAAAAAGATAAATTTAAAATATATAAAAAAATATGGCC ATACATTATATCCAGAGGATATAATTCTAACATTGCTGAATGGATAATAAATGAGCTTAAATCTAATGAAGCTTTATATA AAGACAATAATATATGCTTAGATGAACAAAATATAAAATTGAGTAAAAATATAGAAAATAACATAAAAGACGAAAATTTA GATGAATTTCATAATAATTCATCTTTTAACAGTAAAAATAATAGTTATAAAGAGAATATTGATATACTTGCTAGAAAAAG ATATGATATTATAATAAAATCAGAAGATGATAAAAATAAAATCTATAGAAGATTAAGTAATTACTTATTGAGAAGGGGAT TTAGTTTTGAAGAAGTAAAGAAAAGTATAAATCATGTTTTATATGAAAGAGAATAA
Upstream 100 bases:
>100_bases AATAAAAGAAGAAGATATATATAATGTAGCTAATAAAGTATTAAATAAACCTACTATACACATACTTTTAAATCAATAAC TGTTTCGGGAGTGCAAAAAT
Downstream 100 bases:
>100_bases AGGAATAGGAGGTTGGTGTTAGATATGAAAACAAATCCAGTTACTTTGATATTAGCTGCAGTGTTTTTTTCCCCTATTTT AAAAGGCTTTCTTTCAAAGT
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MPNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDKNSLNDIIKEDNYIKAKGYALKYIEKSLKTESQ VKEKLYLKEYDEDTVNKVIRFLKDYDFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVA YKLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNNICLDEQNIKLSKNIENNIKDENL DEFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSINHVLYERE
Sequences:
>Translated_311_residues MPNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDKNSLNDIIKEDNYIKAKGYALKYIEKSLKTESQ VKEKLYLKEYDEDTVNKVIRFLKDYDFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVA YKLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNNICLDEQNIKLSKNIENNIKDENL DEFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSINHVLYERE >Mature_310_residues PNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDKNSLNDIIKEDNYIKAKGYALKYIEKSLKTESQV KEKLYLKEYDEDTVNKVIRFLKDYDFIDDDKYCDMYIREKLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAY KLAEKKYKIMILREKDKFKIYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNNICLDEQNIKLSKNIENNIKDENLD EFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVKKSINHVLYERE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 37563; Mature: 37432
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDKNSLNDIIKEDNY CCCCEEEEEEECCCCCEEEEEEECCCCCEECCCEEEEECCCCCCEECCCHHHHHHCCCCE IKAKGYALKYIEKSLKTESQVKEKLYLKEYDEDTVNKVIRFLKDYDFIDDDKYCDMYIRE EEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAYKLAEKKYKIMILREKDKFK HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH IYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNNICLDEQNIKLSKNIENNIKDENL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEECCCCCEEECCCCCCCCCCCH DEFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVK HHHCCCCCCCCCCCCHHHHHHHHEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH KSINHVLYERE HHHHHHHCCCC >Mature Secondary Structure PNIITKIEVQKRNKDRVNVYIDEEFNFACSSELIYYHNLKKGKVIDKNSLNDIIKEDNY CCCEEEEEEECCCCCEEEEEEECCCCCEECCCEEEEECCCCCCEECCCHHHHHHCCCCE IKAKGYALKYIEKSLKTESQVKEKLYLKEYDEDTVNKVIRFLKDYDFIDDDKYCDMYIRE EEECCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH KLNIYGRNKIKYTLLNKGVKENIVIEKINNINEEKEKKVAYKLAEKKYKIMILREKDKFK HHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCHHH IYKKIWPYIISRGYNSNIAEWIINELKSNEALYKDNNICLDEQNIKLSKNIENNIKDENL HHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEECCCCCEEECCCCCCCCCCCH DEFHNNSSFNSKNNSYKENIDILARKRYDIIIKSEDDKNKIYRRLSNYLLRRGFSFEEVK HHHCCCCCCCCCCCCHHHHHHHHEECCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHH KSINHVLYERE HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA