| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757458
Identifier: 170757458
GI number: 170757458
Start: 2681278
End: 2682156
Strand: Reverse
Name: 170757458
Synonym: CLD_2070
Alternate gene names: NA
Gene position: 2682156-2681278 (Counterclockwise)
Preceding gene: 170754970
Following gene: 170757345
Centisome position: 67.76
GC content: 30.6
Gene sequence:
>879_bases GTGGGACTAATATTACATCGGGAGTTTGTTTATGGAGAAGGAGGACAGGAAGCAGAGACACTTTTAATAAAAGGTATAAT GATCCAAGGACTATCTAAAAGAAGAATTATAATACCAGATATAGGGCAAGAATTTGATAGTTGTATTGGTAACCAGGAAA CTATAATGAAATATTTCGTATACAAAAGCTGTATTAGTCCAACGGACTTGAATAGAAAAATAGATAATTTGATTATAGCA GTAGATAAAAAACGTGGTGAAAATGATAGGTGGAGGGGAGCTTATGAAAGCTTAGACGAAAAGTTAAAAGAAATAGGGGA ATACAGCAATCTTGGTTGGAACATTGTACTAGATCATAAACAAAAAAAATTTATATTTGATGTAATGCAAGGAAAGGACT TAACGGTTAATCAAAACACTAACCCTCCAGTTATTTTTCGTTCTGATTTTAATAACATAAAGACTAGACATTATACAGAA AGCATTATTAATAGTAGAAATTCTCTTTACATTGGGAGTAAAGAAAAGTTAGTTTTAAACCTTGGTGATATAACTGGATT TGAAAGAATGGAAACATTTTTAGATAGTACATCAGAGGAAGTAGAGGATATAAAAAAAGAAGGTTTAGTTAAACTTGAAG AAATTAAGGAGCTAAAAACATTTGAACTAGAAATTAATCCAAACAATACATTTGTGTACGAAAAAGACTATGATTTAGGG GATATAGTTACTATCCAGGATAAGAAATTAAAAGTAACTATGGATAGTAGAATTGTAGAAGCACAGGAAGTGTATAGTAA TGATGGTATGAAACTTAAAGCTACTTTTGGTACAAGAATACCAAGTTTACTTGCTGTGTTAAAAAGGATGGTGAAATAA
Upstream 100 bases:
>100_bases TGAATGTGGAGAATTTGAATTTAAAATTAACTCTAATAAACTTCATACAGATAAATTAGTAAAAAATAACTTGATTCTCT TAGGAAAGGATTATAACAAG
Downstream 100 bases:
>100_bases GAAGTAATGGAAAAGAGCTTTGTATTTAACAGTGTAAACGGAGATAGAAGGTATAAAGCGGAAGATTTTAGAGAATATTT TGCAAGTTTCATAAGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Minor Protein N- Region
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFVYKSCISPTDLNRKIDNLIIA VDKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHKQKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTE SIINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLG DIVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK
Sequences:
>Translated_292_residues MGLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFVYKSCISPTDLNRKIDNLIIA VDKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHKQKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTE SIINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLG DIVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK >Mature_291_residues GLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFVYKSCISPTDLNRKIDNLIIAV DKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHKQKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTES IINSRNSLYIGSKEKLVLNLGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLGD IVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33651; Mature: 33520
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFV CCEEEEEHEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCHHHHHHHHH YKSCISPTDLNRKIDNLIIAVDKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHK HHHHCCCCCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC QKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTESIINSRNSLYIGSKEKLVLN CHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEE LGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLG ECCCCCHHHHHHHHCCCHHHHHHHHHHCCEEHHHHHCCEEEEEEECCCCEEEEECCCCCC DIVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK CEEEEECCEEEEEECHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure GLILHREFVYGEGGQEAETLLIKGIMIQGLSKRRIIIPDIGQEFDSCIGNQETIMKYFV CEEEEEHEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHCCCHHHHHHHHH YKSCISPTDLNRKIDNLIIAVDKKRGENDRWRGAYESLDEKLKEIGEYSNLGWNIVLDHK HHHHCCCCCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC QKKFIFDVMQGKDLTVNQNTNPPVIFRSDFNNIKTRHYTESIINSRNSLYIGSKEKLVLN CHHHHHHHHCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEECCCCEEEEE LGDITGFERMETFLDSTSEEVEDIKKEGLVKLEEIKELKTFELEINPNNTFVYEKDYDLG ECCCCCHHHHHHHHCCCHHHHHHHHHHCCEEHHHHHCCEEEEEEECCCCEEEEECCCCCC DIVTIQDKKLKVTMDSRIVEAQEVYSNDGMKLKATFGTRIPSLLAVLKRMVK CEEEEECCEEEEEECHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA