| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yieN [C]
Identifier: 170757387
GI number: 170757387
Start: 3464266
End: 3465594
Strand: Reverse
Name: yieN [C]
Synonym: CLD_1342
Alternate gene names: 170757387
Gene position: 3465594-3464266 (Counterclockwise)
Preceding gene: 170757166
Following gene: 170755091
Centisome position: 87.55
GC content: 25.13
Gene sequence:
>1329_bases ATGCAGGAATTTGATGATTTTTTTAAAGAGTTAAATTTAGAAAAAGAAAAATATGAATCTAAATACACAAAGACTAGTAA TGAAGAAAAAGCTAATGATGAGGATAATTTTATAATAGAAATAAATTCGAAAGAAGTAGATAAGCTTTATGAAAGTGGAT TAGCAAAAATAAATCGTATAGAAGAAGAGCTTAATGATTTTTTCGTAGAACGTGAAGAAATTATAAAGGATGCTTTAAGA GCTTTAGTAATTGGACAACATATGTTTTTATATGGCCCCCCAGGGACTGGTAAAAGTTTATTAGTATACAATATATGTAA AAGAATAGATGGAGCTAGGTATTTTCAATGGTTATTAAACAAAACTTCAGATCCAGCAGAGATATTAGGACCTTACAGTA TTAAAGCTATGGAACAGGATAAATTTTTAAGAAAAACTAATGGCAAATTACCAGAAGCACATATTGCATTTATAGATGAA ATATGGAAAAGTAATGAGCCTACTTTAAATATATTATTACCACTTCTTAATGAAAAAATATTTTATAATGATGGGAAAGC TATAAAAGTTCCTTTAGTAAGCATGTTTTGTGCAAGTAACGAAATACCAGATGATGAAAGTTTAAATGCTTTATATGATA GGATAATATTTAGAGATTACCTAGGATATGTAAAGGATACGGATAATAAGTTAAAGATGTTTAAAAATTATGTAAGTATG AGAAATAGTGAAAATGAAATAAAAGTAAATACAAAAATAAAATTAGAAGAAATTTATGCTCTACAAAAGAAAACAGAAAC TATAGAAATTAAAGATGATATATATTTAGACTTTATAAAGCTGATGGACAATTTAGAAAGAAATGGAATAATTATATCGG ACAGAAGAAAAAATGAGTGTTTAAAAGTTATTCAGGGAAATGCATTATTATGTGGAAGAAATTATGCGGTTGTAGAAGAT TTTGAAGCATTAAAAAATATTCTATGGAATGATTTGGATGATATAGCGATTATTGAAACTAATATAATAAAAATAATAAA TCCTTATGATGATAAAGTTAGAGACTATGTTAGAAAATTTAATGAAATAAAAGAAGAAATAGATTATATAGAAGATAAGG ATGAAAAAATTAGAGCCACTATTGAAGCTAAAGTGAGTATAGAGAATATTATTAAAAGACTAAATATATTAATAGAAGAA GCCCAAAATAAAGGGAAAGATACAAAAAATATGGTTAAAAAGAAAAAATATATAGAAGATTATAATGAAAGCATAATGAA GGAAGTTTTAGGTATAGATTTAAGTTTTGAACAAGATAGTGATATATAA
Upstream 100 bases:
>100_bases CAAAATAATATAGTTAATATAAAATATAAAGATAGGATTATAGTGTATGTAATACTTATAACTAGAGTGTATGCAATACT TATAATTAGGAGGTAAATAA
Downstream 100 bases:
>100_bases TTATTTTGAAAGGAGTCTTTAAATGAAACTAAATTATTACCAGGTGGTTTTTGAAGAGGATAGAGAAAAGGAAGAGATTT CTACAGAAAAAAATGATAAT
Product: AAA family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MQEFDDFFKELNLEKEKYESKYTKTSNEEKANDEDNFIIEINSKEVDKLYESGLAKINRIEEELNDFFVEREEIIKDALR ALVIGQHMFLYGPPGTGKSLLVYNICKRIDGARYFQWLLNKTSDPAEILGPYSIKAMEQDKFLRKTNGKLPEAHIAFIDE IWKSNEPTLNILLPLLNEKIFYNDGKAIKVPLVSMFCASNEIPDDESLNALYDRIIFRDYLGYVKDTDNKLKMFKNYVSM RNSENEIKVNTKIKLEEIYALQKKTETIEIKDDIYLDFIKLMDNLERNGIIISDRRKNECLKVIQGNALLCGRNYAVVED FEALKNILWNDLDDIAIIETNIIKIINPYDDKVRDYVRKFNEIKEEIDYIEDKDEKIRATIEAKVSIENIIKRLNILIEE AQNKGKDTKNMVKKKKYIEDYNESIMKEVLGIDLSFEQDSDI
Sequences:
>Translated_442_residues MQEFDDFFKELNLEKEKYESKYTKTSNEEKANDEDNFIIEINSKEVDKLYESGLAKINRIEEELNDFFVEREEIIKDALR ALVIGQHMFLYGPPGTGKSLLVYNICKRIDGARYFQWLLNKTSDPAEILGPYSIKAMEQDKFLRKTNGKLPEAHIAFIDE IWKSNEPTLNILLPLLNEKIFYNDGKAIKVPLVSMFCASNEIPDDESLNALYDRIIFRDYLGYVKDTDNKLKMFKNYVSM RNSENEIKVNTKIKLEEIYALQKKTETIEIKDDIYLDFIKLMDNLERNGIIISDRRKNECLKVIQGNALLCGRNYAVVED FEALKNILWNDLDDIAIIETNIIKIINPYDDKVRDYVRKFNEIKEEIDYIEDKDEKIRATIEAKVSIENIIKRLNILIEE AQNKGKDTKNMVKKKKYIEDYNESIMKEVLGIDLSFEQDSDI >Mature_442_residues MQEFDDFFKELNLEKEKYESKYTKTSNEEKANDEDNFIIEINSKEVDKLYESGLAKINRIEEELNDFFVEREEIIKDALR ALVIGQHMFLYGPPGTGKSLLVYNICKRIDGARYFQWLLNKTSDPAEILGPYSIKAMEQDKFLRKTNGKLPEAHIAFIDE IWKSNEPTLNILLPLLNEKIFYNDGKAIKVPLVSMFCASNEIPDDESLNALYDRIIFRDYLGYVKDTDNKLKMFKNYVSM RNSENEIKVNTKIKLEEIYALQKKTETIEIKDDIYLDFIKLMDNLERNGIIISDRRKNECLKVIQGNALLCGRNYAVVED FEALKNILWNDLDDIAIIETNIIKIINPYDDKVRDYVRKFNEIKEEIDYIEDKDEKIRATIEAKVSIENIIKRLNILIEE AQNKGKDTKNMVKKKKYIEDYNESIMKEVLGIDLSFEQDSDI
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082326, Length=314, Percent_Identity=32.1656050955414, Blast_Score=174, Evalue=9e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011704 - InterPro: IPR001270 [H]
Pfam domain/function: PF07728 AAA_5 [H]
EC number: NA
Molecular weight: Translated: 51835; Mature: 51835
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFDDFFKELNLEKEKYESKYTKTSNEEKANDEDNFIIEINSKEVDKLYESGLAKINRI CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH EEELNDFFVEREEIIKDALRALVIGQHMFLYGPPGTGKSLLVYNICKRIDGARYFQWLLN HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHC KTSDPAEILGPYSIKAMEQDKFLRKTNGKLPEAHIAFIDEIWKSNEPTLNILLPLLNEKI CCCCHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCEE FYNDGKAIKVPLVSMFCASNEIPDDESLNALYDRIIFRDYLGYVKDTDNKLKMFKNYVSM EECCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RNSENEIKVNTKIKLEEIYALQKKTETIEIKDDIYLDFIKLMDNLERNGIIISDRRKNEC CCCCCCEEEEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCEEEECCCHHHH LKVIQGNALLCGRNYAVVEDFEALKNILWNDLDDIAIIETNIIKIINPYDDKVRDYVRKF HHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHH NEIKEEIDYIEDKDEKIRATIEAKVSIENIIKRLNILIEEAQNKGKDTKNMVKKKKYIED HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YNESIMKEVLGIDLSFEQDSDI HHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQEFDDFFKELNLEKEKYESKYTKTSNEEKANDEDNFIIEINSKEVDKLYESGLAKINRI CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH EEELNDFFVEREEIIKDALRALVIGQHMFLYGPPGTGKSLLVYNICKRIDGARYFQWLLN HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHC KTSDPAEILGPYSIKAMEQDKFLRKTNGKLPEAHIAFIDEIWKSNEPTLNILLPLLNEKI CCCCHHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCEE FYNDGKAIKVPLVSMFCASNEIPDDESLNALYDRIIFRDYLGYVKDTDNKLKMFKNYVSM EECCCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RNSENEIKVNTKIKLEEIYALQKKTETIEIKDDIYLDFIKLMDNLERNGIIISDRRKNEC CCCCCCEEEEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHCCCCCCEEEECCCHHHH LKVIQGNALLCGRNYAVVEDFEALKNILWNDLDDIAIIETNIIKIINPYDDKVRDYVRKF HHHHCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEEEECCCCHHHHHHHHHH NEIKEEIDYIEDKDEKIRATIEAKVSIENIIKRLNILIEEAQNKGKDTKNMVKKKKYIED HHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YNESIMKEVLGIDLSFEQDSDI HHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]