| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757346
Identifier: 170757346
GI number: 170757346
Start: 2345101
End: 2345394
Strand: Reverse
Name: 170757346
Synonym: CLD_2420
Alternate gene names: NA
Gene position: 2345394-2345101 (Counterclockwise)
Preceding gene: 170757569
Following gene: 170756285
Centisome position: 59.25
GC content: 32.31
Gene sequence:
>294_bases ATGGACAATAAACTATTAACTCAAAAAGATTTATCTGAAAGATGGCAAGTAAGCGTAAAAGCAATAGAAAGTTATAGACA ACAAGGATTAATAACTTCAGTGGAAGGATTACCTTCTATAAGATTTAATCCTCAGCACATAGCAGAGCTGGAAGGTACTA AGCTAGAAAGATTTAGTCCACTAGAACGTAGACGTATGGAAAGAGAGTTGGAACAAATTAAACAAGAAAATGAAAAGCTT AAAGGTATATTAAGTCAAACTTTAGCTAACTTAGCACCTGTTATCAATTTGTAA
Upstream 100 bases:
>100_bases ATTAAGTGGGAAGACATACCAGTTAGTAAGTATAATACAGTGCATGCTTTCATTGAAGAAGTCGTATGCAAAAATATATA GTACAAAAGGAGGTTTATAC
Downstream 100 bases:
>100_bases AGGAGGGAATACAAATGCTTAAAAGATTACTTGCAGAAAGAGGTGTTATTTTAACAAAAGAATTATCAGATATGGTAATA GCAGATATTAAATTTAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSPLERRRMERELEQIKQENEKL KGILSQTLANLAPVINL
Sequences:
>Translated_97_residues MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSPLERRRMERELEQIKQENEKL KGILSQTLANLAPVINL >Mature_97_residues MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSPLERRRMERELEQIKQENEKL KGILSQTLANLAPVINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11271; Mature: 11271
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCHHCCH LERRRMERELEQIKQENEKLKGILSQTLANLAPVINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDNKLLTQKDLSERWQVSVKAIESYRQQGLITSVEGLPSIRFNPQHIAELEGTKLERFSP CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHCCCCCCHHCCH LERRRMERELEQIKQENEKLKGILSQTLANLAPVINL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA