| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757345
Identifier: 170757345
GI number: 170757345
Start: 2679631
End: 2681271
Strand: Reverse
Name: 170757345
Synonym: CLD_2071
Alternate gene names: NA
Gene position: 2681271-2679631 (Counterclockwise)
Preceding gene: 170757458
Following gene: 170755945
Centisome position: 67.74
GC content: 32.11
Gene sequence:
>1641_bases ATGGAAAAGAGCTTTGTATTTAACAGTGTAAACGGAGATAGAAGGTATAAAGCGGAAGATTTTAGAGAATATTTTGCAAG TTTCATAAGCAATGGAGTGTTCCCTAATCCAAGCAATAATCTGCAAGTTATAGCTAATAATGATATGACTATAACAATTA AAGCCGGTAAGGGGTGGATTAATGGAGCAATTTATATTAACACAGATGATTATATTTTAAATATAGACGTAGCAGATGGT GTATTAAATAGAATAGATAAAGTTGTATTAAGAATGGATACAGCTGAAAGAAAAATATATTCTTATGTAAAAAAAGGACA ATTTGCAAGTTCTCCAACCGCCCCAACACTTCAACGTGATGCAGATGCATATGAGATAGCATTAGCAGATGTGGCTGTTA ATAAAGGTGCTATTAGTATTACACAGGCTAATATAACAGATTTAAGACTTGATAAAAACTTATGCGGCATAGTGCATGGA ACTGTAGATCAAATAGATGTTACAACTCTATTTAATCAATACAGTACAAGGTTTAAAATAAAATCAGAAGAATTTGAAAA AGAATTTGAAGATTGGCTTAAAACTTTAAAGGATGTTTTAGGGGAGGATACAGCAGGTAATCTATTAAACTTAATAACTA AAAATACTGAAAGTATAAATAATATTAAGTCAGATTTGGCTGATATTACGAAGGATAGTTATCCAATAGTAGAAGCTACT GGAACTAATGCATATGTCGGTGTTAGTGATAAAATTACTAGTTTAAAAAAGGGAACTAGATTTACATTATTTATTGGGAA TAATGCAACAGGAAACTGTACTATAAATATAAATAATTATGGTGCTAAAAATGTTAAAGATCCTTTCGGTAAAATAGTAA ATAATTTAAAATCGAATATACCATACAATCTTTGCTACAATGGCGTGGATTTTATATTACAGGGTAAAGGAGGTGGTGGA AATCTTCAACCTAATCAAGCTTTAGCTGGATACACATTTACTAATGACAATGGTCCACAAGTTGGAGTAGGAGATCCTAA CCTAAAGCCAGAAAATATATTAAACGGTAAAACTATATTCGGTGTTCAAGGGATTGTAAAACGTATAGAGGATATACCAG ATTATTTATCAAATTCTCCAGGTGATACCCATGTTGCTGTAACGAAAGATTATATATGGACTAGAAAAGGATCGAAAAAT GGAGCCGCATATGCTTTTGATATAAATGGTACCCTTAAAAAAACGGTTATACGTGGTGGTAGTGAGAATTTTTTTGCTGC TAGTGATTATCATATGCTATGGTGTTGGGATGGCTCAGTGTCTAATTTTTATTTGACTGATTTAGAAGGTTCAAAAATTA CATCTATATTGTCATCGGATTATTCTGATGTAGGAGCGATTAACTCGAGCACACGTCGCTTTTTTATAGTAACTGGGAGC TGGTTAAAAGTCTATAATTTCGATGGTACACTATTAGGTGAATCCTCAGTTACAAAAAATACTCAAATTATAGCGATAGT ACCAACATCAAAAGGGGCATACTTTTGCACTAGTGGAGGTATTGCAATATTTGTTACAAATAGTGGGGAGCAAAAGGAAA CAACATATGTATCAGCATTATTTTCAAACATATTTCAATAA
Upstream 100 bases:
>100_bases GGAAGTGTATAGTAATGATGGTATGAAACTTAAAGCTACTTTTGGTACAAGAATACCAAGTTTACTTGCTGTGTTAAAAA GGATGGTGAAATAAGAAGTA
Downstream 100 bases:
>100_bases TGAAAATTTATAAAGGAGAAGTTCATTATGTTTTATTATAAACTAGTTAATGTTAGACAAGAAAACGGAGTATACGATTA TAAGGAATTGGATATAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ
Sequences:
>Translated_546_residues MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ >Mature_546_residues MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59877; Mature: 59877
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWI CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEE NGAIYINTDDYILNIDVADGVLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRD CCEEEECCCCEEEEEEHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCCCCCCHHCC ADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHGTVDQIDVTTLFNQYSTRFKI CCEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCCCEEHHHHHHHHCCEEEE KSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNI CCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC PYNLCYNGVDFILQGKGGGGNLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIF CEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCEEE GVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKNGAAYAFDINGTLKKTVIRGG CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCEEEEECCCCEEEHEECCC SENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS CCCEEEECCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSAL EEEEEECCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHH FSNIFQ HHHHCC >Mature Secondary Structure MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWI CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEE NGAIYINTDDYILNIDVADGVLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRD CCEEEECCCCEEEEEEHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCCCCCCHHCC ADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHGTVDQIDVTTLFNQYSTRFKI CCEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCCCEEHHHHHHHHCCEEEE KSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNI CCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC PYNLCYNGVDFILQGKGGGGNLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIF CEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCEEE GVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKNGAAYAFDINGTLKKTVIRGG CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCEEEEECCCCEEEHEECCC SENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS CCCEEEECCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSAL EEEEEECCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHH FSNIFQ HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA