Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170757345

Identifier: 170757345

GI number: 170757345

Start: 2679631

End: 2681271

Strand: Reverse

Name: 170757345

Synonym: CLD_2071

Alternate gene names: NA

Gene position: 2681271-2679631 (Counterclockwise)

Preceding gene: 170757458

Following gene: 170755945

Centisome position: 67.74

GC content: 32.11

Gene sequence:

>1641_bases
ATGGAAAAGAGCTTTGTATTTAACAGTGTAAACGGAGATAGAAGGTATAAAGCGGAAGATTTTAGAGAATATTTTGCAAG
TTTCATAAGCAATGGAGTGTTCCCTAATCCAAGCAATAATCTGCAAGTTATAGCTAATAATGATATGACTATAACAATTA
AAGCCGGTAAGGGGTGGATTAATGGAGCAATTTATATTAACACAGATGATTATATTTTAAATATAGACGTAGCAGATGGT
GTATTAAATAGAATAGATAAAGTTGTATTAAGAATGGATACAGCTGAAAGAAAAATATATTCTTATGTAAAAAAAGGACA
ATTTGCAAGTTCTCCAACCGCCCCAACACTTCAACGTGATGCAGATGCATATGAGATAGCATTAGCAGATGTGGCTGTTA
ATAAAGGTGCTATTAGTATTACACAGGCTAATATAACAGATTTAAGACTTGATAAAAACTTATGCGGCATAGTGCATGGA
ACTGTAGATCAAATAGATGTTACAACTCTATTTAATCAATACAGTACAAGGTTTAAAATAAAATCAGAAGAATTTGAAAA
AGAATTTGAAGATTGGCTTAAAACTTTAAAGGATGTTTTAGGGGAGGATACAGCAGGTAATCTATTAAACTTAATAACTA
AAAATACTGAAAGTATAAATAATATTAAGTCAGATTTGGCTGATATTACGAAGGATAGTTATCCAATAGTAGAAGCTACT
GGAACTAATGCATATGTCGGTGTTAGTGATAAAATTACTAGTTTAAAAAAGGGAACTAGATTTACATTATTTATTGGGAA
TAATGCAACAGGAAACTGTACTATAAATATAAATAATTATGGTGCTAAAAATGTTAAAGATCCTTTCGGTAAAATAGTAA
ATAATTTAAAATCGAATATACCATACAATCTTTGCTACAATGGCGTGGATTTTATATTACAGGGTAAAGGAGGTGGTGGA
AATCTTCAACCTAATCAAGCTTTAGCTGGATACACATTTACTAATGACAATGGTCCACAAGTTGGAGTAGGAGATCCTAA
CCTAAAGCCAGAAAATATATTAAACGGTAAAACTATATTCGGTGTTCAAGGGATTGTAAAACGTATAGAGGATATACCAG
ATTATTTATCAAATTCTCCAGGTGATACCCATGTTGCTGTAACGAAAGATTATATATGGACTAGAAAAGGATCGAAAAAT
GGAGCCGCATATGCTTTTGATATAAATGGTACCCTTAAAAAAACGGTTATACGTGGTGGTAGTGAGAATTTTTTTGCTGC
TAGTGATTATCATATGCTATGGTGTTGGGATGGCTCAGTGTCTAATTTTTATTTGACTGATTTAGAAGGTTCAAAAATTA
CATCTATATTGTCATCGGATTATTCTGATGTAGGAGCGATTAACTCGAGCACACGTCGCTTTTTTATAGTAACTGGGAGC
TGGTTAAAAGTCTATAATTTCGATGGTACACTATTAGGTGAATCCTCAGTTACAAAAAATACTCAAATTATAGCGATAGT
ACCAACATCAAAAGGGGCATACTTTTGCACTAGTGGAGGTATTGCAATATTTGTTACAAATAGTGGGGAGCAAAAGGAAA
CAACATATGTATCAGCATTATTTTCAAACATATTTCAATAA

Upstream 100 bases:

>100_bases
GGAAGTGTATAGTAATGATGGTATGAAACTTAAAGCTACTTTTGGTACAAGAATACCAAGTTTACTTGCTGTGTTAAAAA
GGATGGTGAAATAAGAAGTA

Downstream 100 bases:

>100_bases
TGAAAATTTATAAAGGAGAAGTTCATTATGTTTTATTATAAACTAGTTAATGTTAGACAAGAAAACGGAGTATACGATTA
TAAGGAATTGGATATAGATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG
VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG
TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT
GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG
NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN
GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS
WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ

Sequences:

>Translated_546_residues
MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG
VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG
TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT
GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG
NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN
GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS
WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ
>Mature_546_residues
MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWINGAIYINTDDYILNIDVADG
VLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRDADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHG
TVDQIDVTTLFNQYSTRFKIKSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT
GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNIPYNLCYNGVDFILQGKGGGG
NLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIFGVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKN
GAAYAFDINGTLKKTVIRGGSENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS
WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSALFSNIFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59877; Mature: 59877

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWI
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEE
NGAIYINTDDYILNIDVADGVLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRD
CCEEEECCCCEEEEEEHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCCCCCCHHCC
ADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHGTVDQIDVTTLFNQYSTRFKI
CCEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCCCEEHHHHHHHHCCEEEE
KSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT
EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC
GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNI
CCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
PYNLCYNGVDFILQGKGGGGNLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIF
CEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCEEE
GVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKNGAAYAFDINGTLKKTVIRGG
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCEEEEECCCCEEEHEECCC
SENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS
CCCEEEECCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC
WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSAL
EEEEEECCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHH
FSNIFQ
HHHHCC
>Mature Secondary Structure
MEKSFVFNSVNGDRRYKAEDFREYFASFISNGVFPNPSNNLQVIANNDMTITIKAGKGWI
CCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEECCCCEE
NGAIYINTDDYILNIDVADGVLNRIDKVVLRMDTAERKIYSYVKKGQFASSPTAPTLQRD
CCEEEECCCCEEEEEEHHHHHHHHHHHHHHEECHHHHHHHHHHHCCCCCCCCCCCCHHCC
ADAYEIALADVAVNKGAISITQANITDLRLDKNLCGIVHGTVDQIDVTTLFNQYSTRFKI
CCEEEEEEEEEEECCCEEEEEECCCEEEEECCCCEEEEECCCCCEEHHHHHHHHCCEEEE
KSEEFEKEFEDWLKTLKDVLGEDTAGNLLNLITKNTESINNIKSDLADITKDSYPIVEAT
EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEC
GTNAYVGVSDKITSLKKGTRFTLFIGNNATGNCTININNYGAKNVKDPFGKIVNNLKSNI
CCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
PYNLCYNGVDFILQGKGGGGNLQPNQALAGYTFTNDNGPQVGVGDPNLKPENILNGKTIF
CEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCCCEEE
GVQGIVKRIEDIPDYLSNSPGDTHVAVTKDYIWTRKGSKNGAAYAFDINGTLKKTVIRGG
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECEEEEECCCCCCCEEEEECCCCEEEHEECCC
SENFFAASDYHMLWCWDGSVSNFYLTDLEGSKITSILSSDYSDVGAINSSTRRFFIVTGS
CCCEEEECCEEEEEEECCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC
WLKVYNFDGTLLGESSVTKNTQIIAIVPTSKGAYFCTSGGIAIFVTNSGEQKETTYVSAL
EEEEEECCCEEECCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHH
FSNIFQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA