| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757340
Identifier: 170757340
GI number: 170757340
Start: 2706928
End: 2707794
Strand: Reverse
Name: 170757340
Synonym: CLD_2033
Alternate gene names: NA
Gene position: 2707794-2706928 (Counterclockwise)
Preceding gene: 170754245
Following gene: 170756782
Centisome position: 68.41
GC content: 27.68
Gene sequence:
>867_bases ATGTTTGTAAAGATAGGTGTGATTATTATAGCTAAGAAGTATTATTGGTTAAAGCTTAAAGAAGATTTCTTTAGGCAAAA AGAAATTAAAAAATTAAGGAAAATAGCAGGTGGTGATACATATACAATAATTTATTTAAAAATGATGCTTTTAAGTTTAA AAGATGAAGGGAAATTATTCTTTGAAGGGTTGGAAGATTCTTTTATAGATGAAATAGCTTTAGAAATAGATGAGGATTTA GAAAATGTAAAAGTTACAATAATGTTTTTAATTAAATGCAGATTAATAGAAGAACTTACAGAGAATGAGTTTTTAATGAC GAAGGCATATGAAAGTATAGGTAGTGAAACACAGTCGGCTGAAAGGGTTAGAAGGTTTAGACAAAGAAAAAAAGCGTTAC TTAGTAACGGTGAGGTAACAAAGAGTAACACAGAGATAGATATAGAGAAAGAAAGAGAGATAGATATAGAGAAAGATAAG ATAAAGATAGACTGGAATAAAATATTAGAAGCATGGAATACATTACCAGAACCAATAAAATCAGTACGTTCCATTACAGA TAAAAGAAAAAAGAAAATAAAAATTAGAATGAAAAATTTGAAGTTGACACAAGAAGATATATTAAAAGCAATAGACAAAA TAAGTAAAAGCAACTTCTGTAAGGGAATTAATAAGAAAGGCTGGACAATAGAATTTGATTGGTTATTCAAAGATGATAAT AATATTACAAAGGTTTTAGAAGATAAATATATAAACAAGGATGGTAAATATGGAGATAGAGAAAATAATTCAAAGGATAA AAGCCAATATGACTTCAATAGACCATATACAGGACCAAGTTACAGCGACCAAGAAATTGACTTCTAA
Upstream 100 bases:
>100_bases TGTAGATTAATAAACTCTTTTAAAAAGAAAAAAATAGCTCCCTGCCAGGAGCACAATAATTAAATAAAAATTCGTTAAGT ACAGTTTATAAGAAAATTTA
Downstream 100 bases:
>100_bases TATATGCCACATATGTAATGGTACAGGATGGGAATTTGATAATGAAACAGAAACATATAGAAGGTGTGAATGTTATGAAA AAGAGAAGTTGCAAAGACTT
Product: gp49-like protein
Products: NA
Alternate protein names: Gp49-Like Protein; Replisome Organizer; Phage-Associated Protein; Phage Protein
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLFFEGLEDSFIDEIALEIDEDL ENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSAERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDK IKIDWNKILEAWNTLPEPIKSVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDN NITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF
Sequences:
>Translated_288_residues MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLFFEGLEDSFIDEIALEIDEDL ENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSAERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDK IKIDWNKILEAWNTLPEPIKSVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDN NITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF >Mature_288_residues MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLFFEGLEDSFIDEIALEIDEDL ENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSAERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDK IKIDWNKILEAWNTLPEPIKSVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDN NITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34168; Mature: 34168
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLF CEEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE FEGLEDSFIDEIALEIDEDLENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH ERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDKIKIDWNKILEAWNTLPEPIK HHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCEEEECHHHHHHHHCCCHHHHH SVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDN HHHHHHHHHHHHEEEEHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC NITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFVKIGVIIIAKKYYWLKLKEDFFRQKEIKKLRKIAGGDTYTIIYLKMMLLSLKDEGKLF CEEEEEEEEEECCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEE FEGLEDSFIDEIALEIDEDLENVKVTIMFLIKCRLIEELTENEFLMTKAYESIGSETQSA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHH ERVRRFRQRKKALLSNGEVTKSNTEIDIEKEREIDIEKDKIKIDWNKILEAWNTLPEPIK HHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCCCCCEEEECHHHHHHHHCCCHHHHH SVRSITDKRKKKIKIRMKNLKLTQEDILKAIDKISKSNFCKGINKKGWTIEFDWLFKDDN HHHHHHHHHHHHEEEEHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCC NITKVLEDKYINKDGKYGDRENNSKDKSQYDFNRPYTGPSYSDQEIDF CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA