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The map label for this gene is 170757326

Identifier: 170757326

GI number: 170757326

Start: 2357545

End: 2358945

Strand: Reverse

Name: 170757326

Synonym: CLD_2405

Alternate gene names: NA

Gene position: 2358945-2357545 (Counterclockwise)

Preceding gene: 170756509

Following gene: 170755808

Centisome position: 59.6

GC content: 25.48

Gene sequence:

>1401_bases
TTGAGTAGTATAAACAAGATAAAGCAATATATTTTACAAGTTAAAAATATATCACCTCTTAGAATAGGAAATGGTGAAGA
AGAACGAAATGGGTTATTAATTAGTGATAAACATGCAATTATAAATGGTACTACATTTTCCGGGTTATTTAGGGATTTTC
TAAAAAAAGATAAAGTTAAAGTTAATGATGAAGAATATAAACTAATATTTCCTGAGAGCAGTAATGAAAATAACAAAAAA
GAAACATCAAAAATATATTTCTATGATTCAATATCATATGAAGAGATTGACAAAAAAGATTTGTGTTGTAGGAATCATGT
AAGAATAGATGAAGAGATGGGAAGCTCAGTAGAAAATCATTTATTTAATGAGTATCATATATCAGAAGGAAAAACATTTC
AATTATTTTTTGAAATAAGAGGGTTAGATTTAGAAGAAGACAAGTATAATTGCCTATGCAAGCATTTAGAAAATTTTATA
ACAAAACTTTCATCAGGGCAAATAGCTATAGGAAGCAAATCAAGTTTTGGATTTGGCAAATTTAAAGCTATCAAAGATAA
CAATAAAAGTGGTATATATTATAGAGAATATAATTTGTTAACAGAAAATGGCTTAAATAATTATTTAGATTTTAATTTTG
ATATAAAAAATCTTTCTATGAAAGGCTTTAAGAACTTAAATGTAGATATAAATAATAAAGATAGCAAATTAAAAATAAAA
CTAGAAGCTTATTGTGATGAAGGATTTATAATAAAAGGCGATTCAATTATTGAGAAAAAAGATAAGAAAAAATATACGGT
TGATTTTCCTTATAAAGAATGCATAAATGGAAAAGGTCAATTTATAATTCCATCATCAACTATAAAAGGTGTTGTTAGAG
GATATTGTAATAAGATATTTAGAACTTTAGATGAAACAGGTGAAACAGTTATAAATGAAATGTTTGGAATGAAAGCAGAT
GAATCTGAAAAAATAGAGGGTAAAAAAGGTAATCTTATATTTGAAGATTGTAAAATAGATGGAGAAAAATTACAAAGATA
TAATAGAATTAAGATTGATAGATTTACAGGTGGAGTTATGTCAGGAGCCATATTTAAAGATCAGGTAGCTACGGTTTCAA
AAGATAATCCTATAGAATTTAACGTTGCTTTAAATAAAGAAGATAAGAAGATGTTAGCTTTAATAATATTAGCTTTTAGA
GATATAGGATTAGGATATTTAACTATAGGTAGCGGAAATAATGTTGGATATGGAAGATTTAAAGGAAAATCCATTACCAT
TAGTGGAGCTGGTTATAATAGTAAGTTGGAGTTTGAAAATTTTCAATCTGAAAGTAATATGGATAAATTTCAACTGAAGG
GTGATATAGATAAGTTTAATGAAATAATAAGTATTCTATAA

Upstream 100 bases:

>100_bases
AAAGAAATTCAGGAAGATGAATTCAAAAATGATGAAATTATATTAAAAGCAATAAGAGATATATTGTACTATTCTCTTAA
ATCAAAGGGTGGTGAGAATA

Downstream 100 bases:

>100_bases
AGATAGAAGGTGATAAGATGGAGAACTTAACCAAACTAGAAGTTTTATCTAAGATAGAAAATAGTGGTTATAAATTTGCA
TGGATAAACACTTTTAGTGA

Product: CRISPR-associated RAMP protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MSSINKIKQYILQVKNISPLRIGNGEEERNGLLISDKHAIINGTTFSGLFRDFLKKDKVKVNDEEYKLIFPESSNENNKK
ETSKIYFYDSISYEEIDKKDLCCRNHVRIDEEMGSSVENHLFNEYHISEGKTFQLFFEIRGLDLEEDKYNCLCKHLENFI
TKLSSGQIAIGSKSSFGFGKFKAIKDNNKSGIYYREYNLLTENGLNNYLDFNFDIKNLSMKGFKNLNVDINNKDSKLKIK
LEAYCDEGFIIKGDSIIEKKDKKKYTVDFPYKECINGKGQFIIPSSTIKGVVRGYCNKIFRTLDETGETVINEMFGMKAD
ESEKIEGKKGNLIFEDCKIDGEKLQRYNRIKIDRFTGGVMSGAIFKDQVATVSKDNPIEFNVALNKEDKKMLALIILAFR
DIGLGYLTIGSGNNVGYGRFKGKSITISGAGYNSKLEFENFQSESNMDKFQLKGDIDKFNEIISIL

Sequences:

>Translated_466_residues
MSSINKIKQYILQVKNISPLRIGNGEEERNGLLISDKHAIINGTTFSGLFRDFLKKDKVKVNDEEYKLIFPESSNENNKK
ETSKIYFYDSISYEEIDKKDLCCRNHVRIDEEMGSSVENHLFNEYHISEGKTFQLFFEIRGLDLEEDKYNCLCKHLENFI
TKLSSGQIAIGSKSSFGFGKFKAIKDNNKSGIYYREYNLLTENGLNNYLDFNFDIKNLSMKGFKNLNVDINNKDSKLKIK
LEAYCDEGFIIKGDSIIEKKDKKKYTVDFPYKECINGKGQFIIPSSTIKGVVRGYCNKIFRTLDETGETVINEMFGMKAD
ESEKIEGKKGNLIFEDCKIDGEKLQRYNRIKIDRFTGGVMSGAIFKDQVATVSKDNPIEFNVALNKEDKKMLALIILAFR
DIGLGYLTIGSGNNVGYGRFKGKSITISGAGYNSKLEFENFQSESNMDKFQLKGDIDKFNEIISIL
>Mature_465_residues
SSINKIKQYILQVKNISPLRIGNGEEERNGLLISDKHAIINGTTFSGLFRDFLKKDKVKVNDEEYKLIFPESSNENNKKE
TSKIYFYDSISYEEIDKKDLCCRNHVRIDEEMGSSVENHLFNEYHISEGKTFQLFFEIRGLDLEEDKYNCLCKHLENFIT
KLSSGQIAIGSKSSFGFGKFKAIKDNNKSGIYYREYNLLTENGLNNYLDFNFDIKNLSMKGFKNLNVDINNKDSKLKIKL
EAYCDEGFIIKGDSIIEKKDKKKYTVDFPYKECINGKGQFIIPSSTIKGVVRGYCNKIFRTLDETGETVINEMFGMKADE
SEKIEGKKGNLIFEDCKIDGEKLQRYNRIKIDRFTGGVMSGAIFKDQVATVSKDNPIEFNVALNKEDKKMLALIILAFRD
IGLGYLTIGSGNNVGYGRFKGKSITISGAGYNSKLEFENFQSESNMDKFQLKGDIDKFNEIISIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53258; Mature: 53127

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSINKIKQYILQVKNISPLRIGNGEEERNGLLISDKHAIINGTTFSGLFRDFLKKDKVK
CCHHHHHHHHHHHHCCCCCEEECCCCHHHCCEEEECCCEEEECCCHHHHHHHHHHCCCEE
VNDEEYKLIFPESSNENNKKETSKIYFYDSISYEEIDKKDLCCRNHVRIDEEMGSSVENH
ECCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCHHHHHHCCCEECHHHCCHHHHH
LFNEYHISEGKTFQLFFEIRGLDLEEDKYNCLCKHLENFITKLSSGQIAIGSKSSFGFGK
CCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE
FKAIKDNNKSGIYYREYNLLTENGLNNYLDFNFDIKNLSMKGFKNLNVDINNKDSKLKIK
EEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEE
LEAYCDEGFIIKGDSIIEKKDKKKYTVDFPYKECINGKGQFIIPSSTIKGVVRGYCNKIF
EEEECCCCEEEECCHHCCCCCCCEEEEECCHHHHHCCCCCEEECCHHHHHHHHHHHHHHH
RTLDETGETVINEMFGMKADESEKIEGKKGNLIFEDCKIDGEKLQRYNRIKIDRFTGGVM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCHH
SGAIFKDQVATVSKDNPIEFNVALNKEDKKMLALIILAFRDIGLGYLTIGSGNNVGYGRF
CCCEEHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE
KGKSITISGAGYNSKLEFENFQSESNMDKFQLKGDIDKFNEIISIL
CCCEEEEEECCCCCEECCCCCCCCCCCCEEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
SSINKIKQYILQVKNISPLRIGNGEEERNGLLISDKHAIINGTTFSGLFRDFLKKDKVK
CHHHHHHHHHHHHCCCCCEEECCCCHHHCCEEEECCCEEEECCCHHHHHHHHHHCCCEE
VNDEEYKLIFPESSNENNKKETSKIYFYDSISYEEIDKKDLCCRNHVRIDEEMGSSVENH
ECCCCEEEEECCCCCCCCCCCCEEEEEEECCCHHHCCCHHHHHHCCCEECHHHCCHHHHH
LFNEYHISEGKTFQLFFEIRGLDLEEDKYNCLCKHLENFITKLSSGQIAIGSKSSFGFGK
CCCEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCE
FKAIKDNNKSGIYYREYNLLTENGLNNYLDFNFDIKNLSMKGFKNLNVDINNKDSKLKIK
EEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEE
LEAYCDEGFIIKGDSIIEKKDKKKYTVDFPYKECINGKGQFIIPSSTIKGVVRGYCNKIF
EEEECCCCEEEECCHHCCCCCCCEEEEECCHHHHHCCCCCEEECCHHHHHHHHHHHHHHH
RTLDETGETVINEMFGMKADESEKIEGKKGNLIFEDCKIDGEKLQRYNRIKIDRFTGGVM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCEEEEEECCCHH
SGAIFKDQVATVSKDNPIEFNVALNKEDKKMLALIILAFRDIGLGYLTIGSGNNVGYGRF
CCCEEHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEE
KGKSITISGAGYNSKLEFENFQSESNMDKFQLKGDIDKFNEIISIL
CCCEEEEEECCCCCEECCCCCCCCCCCCEEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA