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The map label for this gene is 170757279

Identifier: 170757279

GI number: 170757279

Start: 2221932

End: 2222333

Strand: Reverse

Name: 170757279

Synonym: CLD_2554

Alternate gene names: NA

Gene position: 2222333-2221932 (Counterclockwise)

Preceding gene: 170754848

Following gene: 170756467

Centisome position: 56.14

GC content: 22.14

Gene sequence:

>402_bases
GTGAAAGAAGCTAAAAATTTTGTGATAAATTTATTTGAAGAAAATATTGAAACACAAATAAAAAATGCAGTGGTTAGTGA
AATAAAATATAAATTAAGCATATATGATGTTAACAAAGGCAATGAGCAGGAAATCAAGTCGGCTATTGATAAAATAGCAC
AATTGATAAAAGTAGATGAAATTTTTATGGTTAAAAAAGAACAATTTAATAGATTAAATCAAGAGAAAAACTATGCAAAT
ATATTAAAATATTTTAATAATAAAGGACTTTACAAAAGTGTAGGTAGATTTTTTGTACTTCAGAATAATAAATACTGGGA
TTTAGTAATAAGATTATTACTAAGTAGTAAAAAATCTAAAATAATAGAAGGCTTAAAAAACTATCTTCCAAGTATAAATT
AA

Upstream 100 bases:

>100_bases
ATGGGATCTATACATTAGATATAGTCGATGTTGAGAATCTATTTATAATCGAAGAAATATCTAAAGTTATAGCCGAACAA
TAGTACGAAATGAAAATGAT

Downstream 100 bases:

>100_bases
ATATAGTAATTCTAATAATTTTATATTACTTGATTAAAAAATTAAAATGAAAAATAAGTGTATATAAGATATATAAAAGG
TGGGAGAAAAATGGGGATTC

Product: viral A-type inclusion repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKEAKNFVINLFEENIETQIKNAVVSEIKYKLSIYDVNKGNEQEIKSAIDKIAQLIKVDEIFMVKKEQFNRLNQEKNYAN
ILKYFNNKGLYKSVGRFFVLQNNKYWDLVIRLLLSSKKSKIIEGLKNYLPSIN

Sequences:

>Translated_133_residues
MKEAKNFVINLFEENIETQIKNAVVSEIKYKLSIYDVNKGNEQEIKSAIDKIAQLIKVDEIFMVKKEQFNRLNQEKNYAN
ILKYFNNKGLYKSVGRFFVLQNNKYWDLVIRLLLSSKKSKIIEGLKNYLPSIN
>Mature_133_residues
MKEAKNFVINLFEENIETQIKNAVVSEIKYKLSIYDVNKGNEQEIKSAIDKIAQLIKVDEIFMVKKEQFNRLNQEKNYAN
ILKYFNNKGLYKSVGRFFVLQNNKYWDLVIRLLLSSKKSKIIEGLKNYLPSIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15686; Mature: 15686

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEAKNFVINLFEENIETQIKNAVVSEIKYKLSIYDVNKGNEQEIKSAIDKIAQLIKVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
IFMVKKEQFNRLNQEKNYANILKYFNNKGLYKSVGRFFVLQNNKYWDLVIRLLLSSKKSK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCEEEEECCCHHHHHHHHHHHCHHHH
IIEGLKNYLPSIN
HHHHHHHHCCCCC
>Mature Secondary Structure
MKEAKNFVINLFEENIETQIKNAVVSEIKYKLSIYDVNKGNEQEIKSAIDKIAQLIKVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHH
IFMVKKEQFNRLNQEKNYANILKYFNNKGLYKSVGRFFVLQNNKYWDLVIRLLLSSKKSK
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCEEEEECCCHHHHHHHHHHHCHHHH
IIEGLKNYLPSIN
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA