| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757236
Identifier: 170757236
GI number: 170757236
Start: 616301
End: 616564
Strand: Direct
Name: 170757236
Synonym: CLD_0248
Alternate gene names: NA
Gene position: 616301-616564 (Clockwise)
Preceding gene: 170756894
Following gene: 170756419
Centisome position: 15.57
GC content: 35.23
Gene sequence:
>264_bases ATGATTGGTGGTAACAATAATTTTGGTAAAGATATTGTAGCTTTGGTGAAGGATGGAAAGGGTGCTGTGACCGGCTATAA ACTAAATAATGGTGAGTTATTAACTAAAGAACAGGCCATAGAAAGAGCAGCAGAGGGAGAAATAAATGATGTAGTTATAG GTACAGCTCAAAATGGAGAACAATATCTACATGGTATACCAGAGAAAACTGGTGGAATAGACCTTCAAACCTTACCAACT GTAAAACAAAATTCATTTGAATAA
Upstream 100 bases:
>100_bases TAAAAATTAATTATAGAATTTTAAAAATTTTATTTAGAAAATATATAAATAAATTTTTATTGGGAAACATAATAACATAT CCTTAATTGGAGGTGTTATT
Downstream 100 bases:
>100_bases ATTTTAGTATTCTTTTAAATAATATTAAAACAGGTATTTCTATAAATTAAGGAATACCTGTTTTAATATATCTCTAAATA AATTTTATTTTATACTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAEGEINDVVIGTAQNGEQYLHGIPEKTGGIDLQTLPT VKQNSFE
Sequences:
>Translated_87_residues MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAEGEINDVVIGTAQNGEQYLHGIPEKTGGIDLQTLPT VKQNSFE >Mature_87_residues MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAEGEINDVVIGTAQNGEQYLHGIPEKTGGIDLQTLPT VKQNSFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9242; Mature: 9242
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAEGEINDVVIGTAQNGE CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEECHHHHHHHHCCCCCCEEEEECCCCCC QYLHGIPEKTGGIDLQTLPTVKQNSFE HHHCCCCCCCCCCCEEECCCCCCCCCC >Mature Secondary Structure MIGGNNNFGKDIVALVKDGKGAVTGYKLNNGELLTKEQAIERAAEGEINDVVIGTAQNGE CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEECHHHHHHHHCCCCCCEEEEECCCCCC QYLHGIPEKTGGIDLQTLPTVKQNSFE HHHCCCCCCCCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA