| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170757221
Identifier: 170757221
GI number: 170757221
Start: 1382912
End: 1383658
Strand: Direct
Name: 170757221
Synonym: CLD_3316
Alternate gene names: NA
Gene position: 1382912-1383658 (Clockwise)
Preceding gene: 170754303
Following gene: 170755868
Centisome position: 34.94
GC content: 26.64
Gene sequence:
>747_bases ATGAATATTAAAAAACTTTTTTCTATATTTACATTAGTAGTTATAGTTTTTACTACAGCATGTACAAATAAAATTAAAGA AACTAATGTAATAGATACAAATGAAAAGCCTAGAGAAGAAACAAAAATTATAGACTCTAATGGAGCAGAAAAAGCAAAAC TTAATTTAGATTTTGGAGCAGGAAAATTAAATGTAAGTGGTAATGAAGAAAAGTTTATGAAGGGTAAATTCATATATAGT AAAAAGGAGTGGAAACCTGAAATAAAATATGAAGTTAAAGATAAAGAAGGAGAAATCACAATTTCTCAATCTTTATTAAA TGGGGGAAATATATCTTTAAATAAAAAGGAATATAATGAATGGGATATAAATTTAAATGAAAAAATACCTATGGAAATAA AATTAAATCTAGGAGCAGGAGAATTTAAAGCAGATTTGAATAAGATAAACTTAAAAGAATTAAATGTTGAGATGGGAGTA GGAAAGGTGGACTTGGATATATCAGGTAATTATCAAAGCAATGTTAAAGTAGATATACAAGGTGGAGTTGGTGAAGCAAC TGTATACTTACCTAAATCTATGGGGGTTAAGATAAAAGCTGAAAAAGGGGTAGGTACAATTAATGCTAATGGATTTATAG TAGAGGATGGAAATATCTATAAAAATTCTCAATATGGAAAAAGTAAAAATAACATAGATGTTAATATTGAAGCTGGAGTG GGAGCTATTAATATAAAAGAAAAGTAA
Upstream 100 bases:
>100_bases ATACATGTTGAACTATGTTAATTATTGACTATCTTATGAATACGATGATAAAATTTTTTACATAGTAAATATAAATACTG AATTTTAATGGGGGAATAGA
Downstream 100 bases:
>100_bases AAAAATATTTAAGCTAGGTAAATTATATATTTACTGTTAAGAAAAATAAATATAGATTAATATTTAATCAAATTTTATGA GATATAGTAATAAGGTCACT
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MNIKKLFSIFTLVVIVFTTACTNKIKETNVIDTNEKPREETKIIDSNGAEKAKLNLDFGAGKLNVSGNEEKFMKGKFIYS KKEWKPEIKYEVKDKEGEITISQSLLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKVDLDISGNYQSNVKVDIQGGVGEATVYLPKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK
Sequences:
>Translated_248_residues MNIKKLFSIFTLVVIVFTTACTNKIKETNVIDTNEKPREETKIIDSNGAEKAKLNLDFGAGKLNVSGNEEKFMKGKFIYS KKEWKPEIKYEVKDKEGEITISQSLLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKVDLDISGNYQSNVKVDIQGGVGEATVYLPKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK >Mature_248_residues MNIKKLFSIFTLVVIVFTTACTNKIKETNVIDTNEKPREETKIIDSNGAEKAKLNLDFGAGKLNVSGNEEKFMKGKFIYS KKEWKPEIKYEVKDKEGEITISQSLLNGGNISLNKKEYNEWDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGV GKVDLDISGNYQSNVKVDIQGGVGEATVYLPKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV GAINIKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27445; Mature: 27445
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKKLFSIFTLVVIVFTTACTNKIKETNVIDTNEKPREETKIIDSNGAEKAKLNLDFGA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHEEECCCCCCEEEEEEEECC GKLNVSGNEEKFMKGKFIYSKKEWKPEIKYEVKDKEGEITISQSLLNGGNISLNKKEYNE CEEEECCCHHHEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCCE WDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGVGKVDLDISGNYQSNVKVDIQ EEEECCCCCCEEEEEECCCCHHECCCCEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEE GGVGEATVYLPKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV CCCCCEEEEEECCCCEEEEECCCCEEECCCEEEEECCCEEECCCCCCCCCCEEEEEECCC GAINIKEK EEEEEECC >Mature Secondary Structure MNIKKLFSIFTLVVIVFTTACTNKIKETNVIDTNEKPREETKIIDSNGAEKAKLNLDFGA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHEEECCCCCCEEEEEEEECC GKLNVSGNEEKFMKGKFIYSKKEWKPEIKYEVKDKEGEITISQSLLNGGNISLNKKEYNE CEEEECCCHHHEEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCEEECCCCCCE WDINLNEKIPMEIKLNLGAGEFKADLNKINLKELNVEMGVGKVDLDISGNYQSNVKVDIQ EEEECCCCCCEEEEEECCCCHHECCCCEEEEEEEEEEECCCEEEEEECCCCCCCEEEEEE GGVGEATVYLPKSMGVKIKAEKGVGTINANGFIVEDGNIYKNSQYGKSKNNIDVNIEAGV CCCCCEEEEEECCCCEEEEECCCCEEECCCEEEEECCCEEECCCCCCCCCCEEEEEECCC GAINIKEK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA