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The map label for this gene is trg [C]

Identifier: 170757202

GI number: 170757202

Start: 3488385

End: 3490391

Strand: Reverse

Name: trg [C]

Synonym: CLD_1319

Alternate gene names: 170757202

Gene position: 3490391-3488385 (Counterclockwise)

Preceding gene: 170754334

Following gene: 170754314

Centisome position: 88.18

GC content: 28.45

Gene sequence:

>2007_bases
ATGAAAAGTATAAAGTCTAAGATAGTAACAATTATAGCTATAGTTTGTATAGTAAGTGTGGCTTTATGTTCTTCTATAAG
TTACTATTTTTCTTATAAAGCTATAATGGCCGAATCTACCAATAAAGTGAGTATGGCATCTCAAAAATATTCAGAAATGA
TAAATGGATGGCTTTTAACTAAGGCTAAATTAATGGACTCAATGGTAGTAGATTTTCAATATAATAATAAATATGATCAA
AAAAATATATATAGCTATTTTCAAAGTCAATTAAAAGATAATAAAGACGTTATAGGCATGTATGTTGGCTTTGAGGATAA
AAAATTTATATCTGGTAATGGCTGGATACCAACTAAAGATTATGATTGCAGGCAAAGAGATTGGTATAAAGAAGCTGTTA
AAAAAAATGGAGTAATATATTCGGCTCCATATATAGATAAAAAATTTAATAGCATGGTAATAACTGTAGCTAAACCAATT
AAAAAAGATGGAAGAATAATAGGGGTTGTGGGTATGGATGTAGTTGTAGATTACCTTAAAACTCTAGTACAAAAAGCAAC
GCCAGTAAAAAATAGTTATGGTTTTTTATTAGATAATAATAATGATTTTATTGTTCATCCTAATAAGGAATTTCAACCTA
AAGATGAAAAAATGACTAATGTAAACAAAATTATGGATGGAAAATTAAAAGATTTAGCACAGTTAGATTCTAGCAATAAT
AAAGTTCTAAAGTCAAAAGACTATGATAATAAAGAAAAAATATTTACAAGAAGTAAGATACCATCATCAAATTGGTCAGT
AGGATTTTCAGTACCTGTAGAAGAGTTTAAAAAACCTTTAAATAATATTATTATAGGCTTTCTATCAGTTATAGCAATAT
CCTTAGCGGCAGCAGTAATTTTTGCCCTATATGCAGGTAAAAAAATATCTGATCCTATTTTAAAGATAACAGAGTTAGTA
AATGAAACAAAAGATCTAGATTTAACTAGCAGGAACAACTATGAAACTATAGCTTTATATAAAGATGAAACAGGAATAAT
AGGTAGGGCGGTTATAGATTTAAGAGAAGAATTAAAAAATATTGTAGAAGAACTAAAAAAATCATCAAAGGATGTATTAA
AATATTCAGAAATAGTAAATGGAGCTACGGATGAAACCGTTCAATCCATAGAAGCAATATCAACAACAGTAGATGAACTA
GCAAAGGGATCTGTAGATCAGGCTAAAGATGCACAAAATGGGTCAGAAAAATTGTTTAGTTTAGCAGAAGAAATTAAAAT
AACACATAATAGTACGAATTTAGTCAAAACATATTCTTTGGAAACTAAAGAAAATAGTGGAAAAGGCATATTATCTATGG
AGGAAACTATAGATAAATTTAAAGAGAATAATAGGGTAAACAAAGAATTGGGTAAAAATGTAGAGATGTTATCTAATAAG
TCAGGATCTATAGGAGAAATAATAAATTCCATACAATCTATTGCGGAACAAACCAATCTATTAGCTTTAAATGCAGCTAT
AGAAGCAGCTAGAGCAGGAGAAGCAGGAAAGGGTTTTGCGGTTGTGGCTGAAGAAATAAGAAAATTAGCAGAGCAAACAT
CTATTTCAACTAAAGAAATAGAAAATATAGTAAGGGAAATACAATTTGAAATAGATAATACAAAAAATAATATGGATTTA
TCAGAGAAAGTTGTGGGAGAAGTAAATGATGCTATGAAAATATCAAAGAAATCCTTTGATATTATAACAAAATCTATAGT
AGATATAATAAATCAAATAGAAGTTTTGGTAGAAAATGTTAATAAGGTAGATTCAGATAAGGAAGAAGTATTAACTTCAA
TACAAGGAATATCTGCTATAGCTGAAGAGTCAGCAGCTTCTACAGAAGAAGTATCAGCTTCCGTTGAAGAACAAACAGCA
TCTATGGAAAGTATTTCACAAACAGCTAAAGATTTAAAGGAAATAACAAGCACATTAGACGAGCTAGTTAATAAATTTAA
AATTTAG

Upstream 100 bases:

>100_bases
AAATAAAGATAAAATTGTAATTTGTGTATTAATTTTTGTGAAATTTAAACGATAACATAAATATTATTATTATTTTAACA
AAGTTGGGAGAGAAATATAT

Downstream 100 bases:

>100_bases
TAATAATATTAATTTAAACTTGAATAAAAAGGTCTTTATTTAGTGAAATTTTATATAAATTGAGTTTTACAAATAAAGAC
CTCTTTATTTAATTCTTATT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KNIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKNGVIYSAPYIDKKFNSMVITVAKPI
KKDGRIIGVVGMDVVVDYLKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLAAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSGKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEVLVENVNKVDSDKEEVLTSIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFKI

Sequences:

>Translated_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KNIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKNGVIYSAPYIDKKFNSMVITVAKPI
KKDGRIIGVVGMDVVVDYLKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLAAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSGKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEVLVENVNKVDSDKEEVLTSIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFKI
>Mature_668_residues
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLTKAKLMDSMVVDFQYNNKYDQ
KNIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKDYDCRQRDWYKEAVKKNGVIYSAPYIDKKFNSMVITVAKPI
KKDGRIIGVVGMDVVVDYLKTLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLDSSNN
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLAAAVIFALYAGKKISDPILKITELV
NETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKNIVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDEL
AKGSVDQAKDAQNGSEKLFSLAEEIKITHNSTNLVKTYSLETKENSGKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEIENIVREIQFEIDNTKNNMDL
SEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEVLVENVNKVDSDKEEVLTSIQGISAIAEESAASTEEVSASVEEQTA
SMESISQTAKDLKEITSTLDELVNKFKI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=316, Percent_Identity=27.8481012658228, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI2367378, Length=272, Percent_Identity=30.1470588235294, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788194, Length=407, Percent_Identity=24.0786240786241, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788195, Length=204, Percent_Identity=30.3921568627451, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1789453, Length=227, Percent_Identity=27.3127753303965, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74426; Mature: 74426

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKNIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVKKNGVIYSAPYIDKKFNSMVITVAKPIKKDGRIIGVVGMDVVVDYLK
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLDSSNN
HHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLAAAVI
CEEECCCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITELVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSLETKENSGKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
HHHHHEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCHHHHHCCCHHHHCCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEVLVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTSIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFKI
HHHHHHCC
>Mature Secondary Structure
MKSIKSKIVTIIAIVCIVSVALCSSISYYFSYKAIMAESTNKVSMASQKYSEMINGWLLT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KAKLMDSMVVDFQYNNKYDQKNIYSYFQSQLKDNKDVIGMYVGFEDKKFISGNGWIPTKD
HHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCCCCCCCCC
YDCRQRDWYKEAVKKNGVIYSAPYIDKKFNSMVITVAKPIKKDGRIIGVVGMDVVVDYLK
CCCHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHH
TLVQKATPVKNSYGFLLDNNNDFIVHPNKEFQPKDEKMTNVNKIMDGKLKDLAQLDSSNN
HHHHHCCCCCCCCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCC
KVLKSKDYDNKEKIFTRSKIPSSNWSVGFSVPVEEFKKPLNNIIIGFLSVIAISLAAAVI
CEEECCCCCCHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FALYAGKKISDPILKITELVNETKDLDLTSRNNYETIALYKDETGIIGRAVIDLREELKN
HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH
IVEELKKSSKDVLKYSEIVNGATDETVQSIEAISTTVDELAKGSVDQAKDAQNGSEKLFS
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHH
LAEEIKITHNSTNLVKTYSLETKENSGKGILSMEETIDKFKENNRVNKELGKNVEMLSNK
HHHHHEEECCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCHHHHHCCCHHHHCCC
SGSIGEIINSIQSIAEQTNLLALNAAIEAARAGEAGKGFAVVAEEIRKLAEQTSISTKEI
CCCHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENIVREIQFEIDNTKNNMDLSEKVVGEVNDAMKISKKSFDIITKSIVDIINQIEVLVENV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKVDSDKEEVLTSIQGISAIAEESAASTEEVSASVEEQTASMESISQTAKDLKEITSTLD
HHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELVNKFKI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA